CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP1
(
Ochotona princeps
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOPRG00000010595
T40005_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000009682
RRM
269
338
VRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIE
ENSOPRP00000009682
RRM
370
408
VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPD
ENSOPRP00000009682
RRM
489
561
IRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQGRPSGEAFIQMKSADRAFLAAQKCHKKTMKDRYVE
Links
Other
RRM
family RBPs
Other
Ochotona princeps
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH44002
Xenopus laevis
AAH44002
I
0.792
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.824
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.829
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.769
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.819
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.810
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.824
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.829
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.824
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.824
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.819
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.815
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.815
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.792
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.806
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.819
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.824
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.829
ESRP1
Equus caballus
ENSECAG00000000784
I
0.824
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.810
ESRP1
Felis catus
ENSFCAG00000009920
I
0.824
ESRP1
Homo sapiens
ENSG00000104413
I
0.829
ESRP1
Meleagris gallopavo
ENSMGAG00000012042
I
0.782
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.829
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.829
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.829
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.833
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.819
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.792
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.787
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.778
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.815