ENSPPYG00000018753 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000018753 T40593_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ESRP2
M141_0.6 		Homo sapiens UGGGRAD RNAcompete
Ray et al.(2013)
RNCMPT00150 		0.731
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000021034 RRM 272 341
ENSPPYP00000021034 RRM 373 445
ENSPPYP00000021034 RRM 492 564

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G15010 Arabidopsis thaliana AT3G15010-TAIR-G N 0.000
B9GGV7_POPTR Populus trichocarpa POPTR_0001s38640 N 0.000
B9H2J4_POPTR Populus trichocarpa POPTR_0004s05450 N 0.000
B9I1M7_POPTR Populus trichocarpa POPTR_0011s07480 N 0.000
cassava18809.valid.m1 Manihot esculenta cassava18809.valid.m1 N 0.000
cassava28994.valid.m1 Manihot esculenta cassava28994.valid.m1 N 0.000
cassava28995.valid.m1 Manihot esculenta cassava28995.valid.m1 N 0.000
cassava28996.valid.m1 Manihot esculenta cassava28996.valid.m1 N 0.000
Glyma07g32660.1 Glycine max Glyma07g32660.1 N 0.000
LjT18N19.10.nd Lotus japonicus LjT18N19.10.nd N 0.000
MDP0000250519 Malus x domestica MDP0000250519 N 0.000
MDP0000596919 Malus x domestica MDP0000596919 N 0.000
mgf018937m Mimulus guttatus mgf018937m N 0.000
PK03611.1 Cannabis sativa PK03611.1 N 0.000
ppa005857m Prunus persica ppa005857m N 0.000
XM_002882862.1 Arabidopsis lyrata fgenesh2_kg.3__1628__AT3G15010.2 N 0.000
XM_002894385.1 Arabidopsis lyrata scaffold_105150.1 N 0.000