ENSPPYG00000018753 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000018753 T40593_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ESRP2
M141_0.6 		Homo sapiens UGGGRAD RNAcompete
Ray et al.(2013)
RNCMPT00150 		0.731
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000021034 RRM 272 341
ENSPPYP00000021034 RRM 373 445
ENSPPYP00000021034 RRM 492 564

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44002 Xenopus laevis AAH44002 I 0.931
Ame_R011562 Ailuropoda melanoleuca Ame_R011562 I 0.722
Ame_R015210 Ailuropoda melanoleuca Ame_R015210 I 0.986
ENSPPYG00000007484 Pongo pygmaeus ENSPPYG00000007484 I 0.727
ESRP1 Monodelphis domestica ENSMODG00000007268 I 0.968
ESRP1 Loxodonta africana ENSLAFG00000001498 I 0.991
ESRP1 Gorilla gorilla ENSGGOG00000003627 I 1.000
ESRP1 Pan troglodytes ENSPTRG00000020430 I 1.000
ESRP1 Homo sapiens ENSG00000104413 I 1.000
ESRP1 Pteropus vampyrus ENSPVAG00000014513 I 0.986
ESRP1 Ochotona princeps ENSOPRG00000010595 N 0.829
ESRP1 Oryctolagus cuniculus ENSOCUG00000001316 I 0.986
ESRP1 Meleagris gallopavo ENSMGAG00000012042 I 0.921
ESRP1 Microcebus murinus ENSMICG00000008757 I 0.991
ESRP1 Myotis lucifugus ENSMLUG00000001816 N 0.806
Esrp1 Mus musculus ENSMUSG00000040728 I 0.977
ESRP1 Macaca mulatta ENSMMUG00000021112 I 0.986
ESRP1 Ornithorhynchus anatinus ENSOANG00000004746 I 0.972
ESRP1 Tursiops truncatus ENSTTRG00000004226 I 0.977
ESRP1 Felis catus ENSFCAG00000009920 I 0.986
ESRP1 Tarsius syrichta ENSTSYG00000006036 I 0.981
ESRP1 Cavia porcellus ENSCPOG00000012197 I 0.991
esrp1 Danio rerio ENSDARG00000011245 I 0.829
ESRP1 Vicugna pacos ENSVPAG00000006566 I 0.977
ESRP1 Takifugu rubripes ENSTRUG00000009287 N 0.757
esrp1 Xenopus tropicalis ENSXETG00000014667 I 0.931
ESRP1 Tetraodon nigroviridis ENSTNIG00000018367 N 0.761
ESRP1 Canis familiaris ENSCAFG00000009305 I 0.986
Esrp1 Dipodomys ordii ENSDORG00000011987 N 0.819
ESRP1 Equus caballus ENSECAG00000000784 I 0.986
ESRP1 Sus scrofa ENSSSCG00000006099 I 0.986
ESRP1 Erinaceus europaeus ENSEEUG00000001673 I 0.981
ESRP1 Anolis carolinensis ENSACAG00000003748 I 0.921
Esrp2 Mus musculus ENSMUSG00000084128 I 0.718
ESRP2 Tursiops truncatus ENSTTRG00000014613 I 0.718
ESRP2 Oryctolagus cuniculus ENSOCUG00000001242 I 0.722
Esrp2 Rattus norvegicus ENSRNOG00000023177 I 0.773
ESRP2 Ochotona princeps ENSOPRG00000013401 I 0.773
ESRP2 Procavia capensis ENSPCAG00000005215 I 0.782
ESRP2 Pan troglodytes ENSPTRG00000008261 I 0.727
ESRP2 Sorex araneus ENSSARG00000014176 I 0.773
ESRP2 Ornithorhynchus anatinus ENSOANG00000010972 I 0.778
ESRP2 Monodelphis domestica ENSMODG00000005183 I 0.801
ESRP2 Homo sapiens ENSG00000103067 D 0.731
ESRP2 Felis catus ENSFCAG00000010419 I 0.722
ESRP2 Echinops telfairi ENSETEG00000006068 I 0.787
ESRP2 Erinaceus europaeus ENSEEUG00000014033 I 0.718
ESRP2 Bos taurus ENSBTAG00000004375 I 0.722
Esrp2 Dipodomys ordii ENSDORG00000000665 I 0.787
ESRP2 Dasypus novemcinctus ENSDNOG00000018588 I 0.778
esrp2 Danio rerio ENSDARG00000018814 I 0.829
ESRP2 Gasterosteus aculeatus ENSGACG00000016359 N 0.788
ESRP2 Canis familiaris ENSCAFG00000020320 I 0.722
ESRP2 Anolis carolinensis ENSACAG00000009900 I 0.806
ESRP2 Gorilla gorilla ENSGGOG00000010150 I 0.731
ESRP2 Loxodonta africana ENSLAFG00000014609 I 0.769
ESRP2 Macropus eugenii ENSMEUG00000014322 I 0.829
ESRP2 Meleagris gallopavo ENSMGAG00000003943 I 0.829
ESRP2 Macaca mulatta ENSMMUG00000021846 I 0.722
ESRP2 Myotis lucifugus ENSMLUG00000005934 I 0.778
ESRP2 Microcebus murinus ENSMICG00000011382 I 0.708
ESRP2_CHICK Gallus gallus ENSGALG00000003374 I 0.829
estExt_gwp.C_3900044 Branchiostoma floridae estExt_gwp.C_3900044 N 0.708
estExt_gwp.C_3900052 Branchiostoma floridae estExt_gwp.C_3900052 N 0.708
LOC100066567 Equus caballus ENSECAG00000017375 I 0.718
LOC100386717 Callithrix jacchus ENSCJAG00000000043 I 0.995
LOC100388530 Callithrix jacchus ENSCJAG00000015709 I 0.722
LOC788414 Bos taurus ENSBTAG00000021838 I 0.981
Q7ZY29 Xenopus laevis Q7ZY29 I 0.931
RBM35A Taeniopygia guttata ENSTGUG00000011907 I 0.931
RBM35A Gallus gallus ENSGALG00000015968 I 0.921
RBM35B Taeniopygia guttata ENSTGUG00000006986 I 0.819
RGD1560481 Rattus norvegicus ENSRNOG00000008184 I 0.977