CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSPPYG00000020541
(
Pongo pygmaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPPYG00000020541
T40610_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000022995
RRM
18
88
VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR
Links
Other
RRM
family RBPs
Other
Pongo pygmaeus
RBPs
137 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Danio rerio
ENSDARG00000020323
N
0.000
NUP153
Gasterosteus aculeatus
ENSGACG00000005389
N
0.000
NUP153
Oryzias latipes
ENSORLG00000012674
N
0.000
NUP153
Tetraodon nigroviridis
ENSTNIG00000009182
N
0.000
NUP153
Takifugu rubripes
ENSTRUG00000010163
N
0.000