CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CELF4
(
Pan troglodytes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPTRG00000009982
T40692_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000016972
RRM
31
99
LFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGAS
ENSPTRP00000046859
RRM
56
125
LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMN
ENSPTRP00000046859
RRM
154
222
LFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGAS
Links
Other
RRM
family RBPs
Other
Pan troglodytes
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
At-RS2Z
Arabidopsis thaliana
AT3G53500-TAIR-G
N
0.000
BGIOSIBCE017670
Oryza indica
BGIOSIBCE017670
N
0.000
Glyma03g33260.1
Glycine max
Glyma03g33260.1
N
0.000
Glyma19g35980.1
Glycine max
Glyma19g35980.1
N
0.000
RS2Z33
Arabidopsis thaliana
AT2G37340-TAIR-G
N
0.000
XM_002877876.1
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001437
N
0.000