CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Snrnp35
(
Rattus norvegicus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSRNOG00000001060
T40999_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000001402
RRM
53
123
LFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHEIF
Links
Other
RRM
family RBPs
Other
Rattus norvegicus
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
22646_YPR107C
Saccharomyces mikatae
22646_YPR107C
N
0.000
23053_YPR107C
Saccharomyces paradoxus
23053_YPR107C
N
0.000
25937_YPR107C
Saccharomyces bayanus
25937_YPR107C
N
0.000
A7TDY4_VANPO
Vanderwaltozyma polyspora
A7TDY4_VANPO
N
0.000
CAGL0G01694g
Candida glabrata
CAGL0G01694g
N
0.000
gww1.4.1.1582.1
Pichia stipitis
gww1.4.1.1582.1
N
0.000
KLLA0F08129g
Kluyveromyces lactis
KLLA0F08129g
N
0.000
KLTH0D02948g
Kluyveromyces thermotolerans
KLTH0D02948g
N
0.000
Kwal_7234
Kluyveromyces waltii
Kwal_7234
N
0.000
SAKL0B09372g
Lachancea kluyveri
SAKL0B09372g
N
0.000
Skud_Contig1473.3
Saccharomyces kudriavzevii
Skud_Contig1473.3
N
0.000
YTH1
Saccharomyces cerevisiae
YPR107C
N
0.000
YTH1
Ashbya gossypii
YTH1
N
0.000