LOC100415261 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000007131 T35537_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000013237 RRM 53 123
ENSCJAP00000013246 RRM 53 123

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SNRNP35 Homo sapiens ENSG00000184209 N 0.972
SNRNP35 Macaca mulatta ENSMMUG00000008411 N 0.972
SNRNP35 Gorilla gorilla ENSGGOG00000015936 N 0.972
SNRNP35 Pan troglodytes ENSPTRG00000023573 N 0.972
ENSPPYG00000005088 Pongo pygmaeus ENSPPYG00000005088 N 0.972
SNRNP35 Otolemur garnettii ENSOGAG00000011301 N 0.958
SNRNP35 Tupaia belangeri ENSTBEG00000002309 N 0.958
SNRNP35 Erinaceus europaeus ENSEEUG00000011544 N 0.944
Snrnp35 Mus musculus ENSMUSG00000029402 N 0.930
Snrnp35 Rattus norvegicus ENSRNOG00000001060 N 0.930
Ame_R000880 Ailuropoda melanoleuca Ame_R000880 N 0.930
ENSDORG00000001859 Dipodomys ordii ENSDORG00000001859 N 0.930
LOC100059055 Equus caballus ENSECAG00000006080 N 0.930
SNRNP35 Felis catus ENSFCAG00000001159 N 0.930
SNRNP35 Choloepus hoffmanni ENSCHOG00000006263 N 0.915
SNRNP35 Pteropus vampyrus ENSPVAG00000015317 N 0.915
SNRNP35 Canis familiaris ENSCAFG00000007484 N 0.915
SNRNP35 Ochotona princeps ENSOPRG00000011119 N 0.915
SNRNP35 Oryctolagus cuniculus ENSOCUG00000021248 N 0.915
U1SBP_BOVIN Bos taurus ENSBTAG00000008060 N 0.901
SNRNP35 Sorex araneus ENSSARG00000012656 N 0.901
SNRNP35 Loxodonta africana ENSLAFG00000022302 N 0.887
SNRNP35 Cavia porcellus ENSCPOG00000002548 N 0.887
SNRNP35 Procavia capensis ENSPCAG00000011478 N 0.887
SNRNP35 Ornithorhynchus anatinus ENSOANG00000002697 N 0.859
SNRNP35 Anolis carolinensis ENSACAG00000015421 N 0.845
B5G0X9_TAEGU Taeniopygia guttata ENSTGUG00000015471 N 0.845
SNRNP35 Taeniopygia guttata ENSTGUG00000005364 N 0.845
SNRNP35 Gallus gallus ENSGALG00000003318 N 0.831
SNRNP35 Monodelphis domestica ENSMODG00000012481 N 0.831
SNRNP35 Meleagris gallopavo ENSMGAG00000003241 N 0.817
SNRNP35 Tetraodon nigroviridis ENSTNIG00000009984 N 0.746
Q05AT9 Xenopus laevis Q05AT9 N 0.732
AAI23362 Xenopus laevis AAI23362 N 0.732
SNRNP35 Takifugu rubripes ENSTRUG00000017100 N 0.732
SNRNP35 Gasterosteus aculeatus ENSGACG00000020631 N 0.718