TIAL1 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000013091 T42110_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.703
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.703
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000016072 RRM 12 60
ENSTNIP00000016072 RRM 99 169
ENSTNIP00000016072 RRM 207 271

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.708
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.703
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.703
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.708
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.703
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.703
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.703
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.703
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.713
Tia1 Mus musculus ENSMUSG00000071337 I 0.708
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.703
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.703
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.703
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.703
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.703
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.703
TIA1 Homo sapiens ENSG00000116001 D 0.703
TIA1 Echinops telfairi ENSETEG00000010021 I 0.708
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.710
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.759
tial1 Danio rerio ENSDARG00000009525 I 0.727
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.778
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.713
TIAL1 Equus caballus ENSECAG00000009970 I 0.708
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.703
Tial1 Mus musculus ENSMUSG00000030846 I 0.708
TIAL1 Homo sapiens ENSG00000151923 D 0.708
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.708
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.742