TIAL1 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000013091 T42110_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.703
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.703
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000016072 RRM 12 60
ENSTNIP00000016072 RRM 99 169
ENSTNIP00000016072 RRM 207 271

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44277 Xenopus laevis AAH44277 I 0.000
AAH70981 Xenopus laevis AAH70981 I 0.000
AAI61696 Xenopus laevis AAI61696 I 0.000
AAI69815 Xenopus laevis AAI69815 I 0.000
AAI69923 Xenopus laevis AAI69923 I 0.000
AAN77160 Xenopus laevis AAN77160 I 0.000
AAN77161 Xenopus laevis AAN77161 I 0.000
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.000
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.000
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.000
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.000
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.000
ENSPPYG00000019172 Pongo pygmaeus ENSPPYG00000019172 I 0.000
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.000
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.000
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.000
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.000
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.000
Fubp1 Mus musculus ENSMUSG00000028034 I 0.000
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.000
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.000
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.000
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.000
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.000
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.000
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.000
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.000
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.000
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.000
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.000
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.000
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.000
fubp1 Danio rerio ENSDARG00000029248 I 0.000
FUBP1 Equus caballus ENSECAG00000010867 I 0.000
FUBP1 Homo sapiens ENSG00000162613 I 0.000
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.000
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.000
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.000
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.000
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.000
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.000
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.000
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.000
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.000
KHSRP Sus scrofa ENSSSCG00000013538 I 0.000
KHSRP Dasypus novemcinctus ENSDNOG00000009590 I 0.000
KHSRP Tetraodon nigroviridis ENSTNIG00000014067 I 0.000
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.000
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.000
KHSRP Takifugu rubripes ENSTRUG00000010395 I 0.000
KHSRP Danio rerio ENSDARG00000026489 I 0.000
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.000
KHSRP Canis familiaris ENSCAFG00000018667 I 0.000
KHSRP Vicugna pacos ENSVPAG00000010837 I 0.000
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.000
khsrp Xenopus tropicalis ENSXETG00000021862 I 0.000
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.000
KHSRP Homo sapiens ENSG00000088247 D 0.000
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.000
KHSRP Myotis lucifugus ENSMLUG00000015543 I 0.000
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.000
Khsrp Mus musculus ENSMUSG00000007670 I 0.000
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.000
KHSRP Ornithorhynchus anatinus ENSOANG00000000261 I 0.000
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.000
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.000
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.000
KHSRP Oryzias latipes ENSORLG00000011882 I 0.000
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.000
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.000
KHSRP Microcebus murinus ENSMICG00000007863 I 0.000
KHSRP Echinops telfairi ENSETEG00000004793 I 0.000
KHSRP Felis catus ENSFCAG00000003731 I 0.000
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.000
KHSRP Procavia capensis ENSPCAG00000000246 I 0.000
LOC100065608 Equus caballus ENSECAG00000018305 I 0.000
LOC505564 Bos taurus ENSBTAG00000021018 I 0.000
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.000
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.000