Q800W4_CHICK (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000013879 T37713_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.990
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.990
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000022466 RRM 9 77
ENSGALP00000022466 RRM 97 167
ENSGALP00000022466 RRM 205 269

Links

Other RRM family RBPs
Other Gallus gallus RBPs

76 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.995
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.995
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.995
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.995
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.995
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.990
TIA1 Canis familiaris ENSCAFG00000003341 I 0.990
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.990
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.990
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.990
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.990
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.990
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.990
TIA1 Echinops telfairi ENSETEG00000010021 I 0.990
TIA1 Homo sapiens ENSG00000116001 D 0.990
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.990
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.990
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.990
Tia1 Mus musculus ENSMUSG00000071337 I 0.985
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.980
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.976
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.941
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.941
AAH80105 Xenopus laevis AAH80105 I 0.937
tia1 Danio rerio ENSDARG00000052536 I 0.932
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.927
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.927
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.927
TIA1 Oryzias latipes ENSORLG00000015642 I 0.927
CAC95018 Xenopus laevis CAC95018 I 0.922
AAH77169 Xenopus laevis AAH77169 I 0.922
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.907
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.907
TIA1 Oryzias latipes ENSORLG00000002529 I 0.907
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.907
TIAL1 Equus caballus ENSECAG00000009970 I 0.893
Tial1 Mus musculus ENSMUSG00000030846 I 0.893
TIAL1 Homo sapiens ENSG00000151923 D 0.893
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.893
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.893
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.893
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.888
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.878
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.878
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.878
tial1 Danio rerio ENSDARG00000009525 I 0.873
tia1l Danio rerio ENSDARG00000026476 I 0.863
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.845
TIA1 Sorex araneus ENSSARG00000001997 I 0.834
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.824
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.824
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.824
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.824
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.824
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.824
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.824
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.824
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.820
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.820
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.820
TIA1 Vicugna pacos ENSVPAG00000007449 I 0.800
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.795
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.784
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.780
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.777
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.776
TIA1 Equus caballus ENSECAG00000022361 I 0.766
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.756
TIA1 Ochotona princeps ENSOPRG00000001066 I 0.737
TIA1 Procavia capensis ENSPCAG00000001859 I 0.737
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.734
TIAL1 Tursiops truncatus ENSTTRG00000014574 I 0.710
TIAL1 Ochotona princeps ENSOPRG00000016546 I 0.707
TIAL1 Gorilla gorilla ENSGGOG00000001816 I 0.706
TIAL1 Tetraodon nigroviridis ENSTNIG00000013091 I 0.703
TIA1 Macropus eugenii ENSMEUG00000013220 I 0.702