CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TIAL1
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000009552
T36320_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
TIA1
M156_0.6
Homo sapiens
WUUUUUB
RNAcompete
Ray et al.(2013)
RNCMPT00165
0.734
TIA1
M075_0.6
Homo sapiens
UUUUUBK
RNAcompete
Ray et al.(2013)
RNCMPT00077
0.734
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000007401
RRM
1
37
YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEXXXXX
ENSDNOP00000007401
RRM
105
175
VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR
ENSDNOP00000007401
RRM
213
277
VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
55 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TIAL1
Vicugna pacos
ENSVPAG00000001240
I
0.918
TIAL1
Oryctolagus cuniculus
ENSOCUG00000003783
I
0.816
A1A4R7_BOVIN
Bos taurus
ENSBTAG00000004080
I
0.812
Tial1
Mus musculus
ENSMUSG00000030846
I
0.812
TIAL1
Homo sapiens
ENSG00000151923
D
0.812
TIAL1
Macaca mulatta
ENSMMUG00000001472
I
0.812
TIAL1
Equus caballus
ENSECAG00000009970
I
0.812
ENSSSCG00000010685
Sus scrofa
ENSSSCG00000010685
I
0.812
TIAL1
Anolis carolinensis
ENSACAG00000016986
I
0.792
TIAL1
Tetraodon nigroviridis
ENSTNIG00000013091
I
0.778
tial1
Danio rerio
ENSDARG00000009525
I
0.758
ENSPPYG00000002703
Pongo pygmaeus
ENSPPYG00000002703
I
0.757
TIAL1
Callithrix jacchus
ENSCJAG00000019682
I
0.757
Tial1
Rattus norvegicus
ENSRNOG00000020271
I
0.757
TIAL1
Canis familiaris
ENSCAFG00000012171
I
0.757
TIAL1
Tarsius syrichta
ENSTSYG00000004348
I
0.757
TIAL1
Pan troglodytes
ENSPTRG00000002996
I
0.757
TIAL1
Monodelphis domestica
ENSMODG00000008865
I
0.757
Q800W1_CHICK
Gallus gallus
ENSGALG00000009427
I
0.757
TIAL1
Pteropus vampyrus
ENSPVAG00000017585
I
0.752
TIAL1
Procavia capensis
ENSPCAG00000003192
I
0.752
Tia1
Mus musculus
ENSMUSG00000071337
I
0.739
TIA1
Dasypus novemcinctus
ENSDNOG00000016356
I
0.738
Ame_R002705
Ailuropoda melanoleuca
Ame_R002705
I
0.738
TIA1
Monodelphis domestica
ENSMODG00000011515
I
0.738
TIA1
Meleagris gallopavo
ENSMGAG00000003493
I
0.738
TIA1
Canis familiaris
ENSCAFG00000003341
I
0.738
TIA1
Cavia porcellus
ENSCPOG00000008327
I
0.734
Q800W4_CHICK
Gallus gallus
ENSGALG00000013879
I
0.734
ENSACAG00000009648
Anolis carolinensis
ENSACAG00000009648
I
0.734
Q0VBZ6_BOVIN
Bos taurus
ENSBTAG00000019182
I
0.734
TIA1
Callithrix jacchus
ENSCJAG00000019278
I
0.734
TIA1
Homo sapiens
ENSG00000116001
D
0.734
TIA1
Loxodonta africana
ENSLAFG00000003463
I
0.734
TIA1
Otolemur garnettii
ENSOGAG00000010572
I
0.734
TIA1
Oryctolagus cuniculus
ENSOCUG00000011204
I
0.734
TIA1
Pan troglodytes
ENSPTRG00000023495
I
0.734
ENSPPYG00000012326
Pongo pygmaeus
ENSPPYG00000012326
I
0.734
Tia1
Rattus norvegicus
ENSRNOG00000016813
I
0.734
TIA1
Macaca mulatta
ENSMMUG00000001126
I
0.734
TIA1
Echinops telfairi
ENSETEG00000010021
I
0.729
TIA1
Tursiops truncatus
ENSTTRG00000001195
I
0.729
TIA1
Pteropus vampyrus
ENSPVAG00000004846
I
0.729
TIAL1
Gasterosteus aculeatus
ENSGACG00000003365
I
0.721
AAH80105
Xenopus laevis
AAH80105
I
0.720
tia1
Xenopus tropicalis
ENSXETG00000008514
I
0.720
AAH77169
Xenopus laevis
AAH77169
I
0.710
CAC95018
Xenopus laevis
CAC95018
I
0.710
TIA1
Oryzias latipes
ENSORLG00000015642
I
0.710
TIA1
Oryzias latipes
ENSORLG00000002529
I
0.709
TIA1
Taeniopygia guttata
ENSTGUG00000017307
I
0.705
TIAL1
Oryzias latipes
ENSORLG00000013798
I
0.705
Tial1
Dipodomys ordii
ENSDORG00000010683
I
0.703
tia1l
Danio rerio
ENSDARG00000026476
I
0.700
TIA1
Gasterosteus aculeatus
ENSGACG00000015800
I
0.700