ENSPPYG00000012326 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000012326 T40531_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.985
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.985
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000013747 RRM 9 77
ENSPPYP00000013747 RRM 108 178
ENSPPYP00000013747 RRM 216 280

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TIA1 Homo sapiens ENSG00000116001 D 0.985
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.985
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.985
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.985
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.985
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.985
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.985
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.980
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.980
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.980
Tia1 Mus musculus ENSMUSG00000071337 I 0.980
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.980
TIA1 Echinops telfairi ENSETEG00000010021 I 0.976
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.976
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.976
TIA1 Canis familiaris ENSCAFG00000003341 I 0.976
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.976
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.976
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.976
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.976
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.971
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.932
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.932
AAH80105 Xenopus laevis AAH80105 I 0.927
TIA1 Oryzias latipes ENSORLG00000015642 I 0.922
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.922
tia1 Danio rerio ENSDARG00000052536 I 0.922
CAC95018 Xenopus laevis CAC95018 I 0.912
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.912
AAH77169 Xenopus laevis AAH77169 I 0.912
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.912
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.898
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.893
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.893
TIA1 Oryzias latipes ENSORLG00000002529 I 0.893
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.878
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.878
Tial1 Mus musculus ENSMUSG00000030846 I 0.878
TIAL1 Homo sapiens ENSG00000151923 D 0.878
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.878
TIAL1 Equus caballus ENSECAG00000009970 I 0.878
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.873
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.873
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.873
tial1 Danio rerio ENSDARG00000009525 I 0.863
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.863
tia1l Danio rerio ENSDARG00000026476 I 0.854
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.835
TIA1 Sorex araneus ENSSARG00000001997 I 0.820
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.811
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.811
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.811
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.811
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.811
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.811
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.811
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.811
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.810
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.806
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.806
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.790
TIA1 Vicugna pacos ENSVPAG00000007449 I 0.785
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.776
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.771
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.770
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.768
TIA1 Equus caballus ENSECAG00000022361 I 0.751
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.741
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.734
TIA1 Ochotona princeps ENSOPRG00000001066 I 0.727
TIA1 Procavia capensis ENSPCAG00000001859 I 0.722
TIAL1 Tetraodon nigroviridis ENSTNIG00000013091 I 0.703