CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GH22433
(
Drosophila grimshawi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0129891
T43541_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0156339
RRM
31
97
AYVGNLPQGLVQGDVMKIFNDFEVKNVRLVKDRDTDMFKGFCYVEFETLDNLERALECDGRIKLDDL
Links
Other
RRM
family RBPs
Other
Drosophila grimshawi
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG1340
Drosophila melanogaster
FBgn0039797
N
0.765
FBgn0262734
Drosophila melanogaster
FBgn0262734
N
0.910
GA12257-RA
Drosophila pseudoobscura
FBgn0072303
N
0.765
GA18178-RA
Drosophila pseudoobscura
FBgn0078185
N
0.925
GD21542
Drosophila simulans
FBgn0192968
N
0.765
GE10899
Drosophila yakuba
FBgn0228732
N
0.779
GE17274
Drosophila yakuba
FBgn0234750
N
0.910
GF19517
Drosophila ananassae
FBgn0096524
N
0.925
GF22920
Drosophila ananassae
FBgn0099914
N
0.779
GG11771
Drosophila erecta
FBgn0104066
N
0.779
GG17966
Drosophila erecta
FBgn0110185
N
0.910
GH14211
Drosophila grimshawi
FBgn0121687
N
0.776
GI21487
Drosophila mojavensis
FBgn0144217
N
0.970
GJ19028
Drosophila virilis
FBgn0206174
N
0.970
GJ24240
Drosophila virilis
FBgn0211322
N
0.746
GK14152
Drosophila willistoni
FBgn0216158
N
0.779
GK25675
Drosophila willistoni
FBgn0227634
N
0.925
GL13513
Drosophila persimilis
FBgn0151118
N
0.765
GL20267
Drosophila persimilis
FBgn0157862
N
0.925
GM12901
Drosophila sechellia
FBgn0167833
N
0.765
GM13442
Drosophila sechellia
FBgn0168373
N
0.910