CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NCLIV_024340
(
Neospora caninum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
NCLIV_024340
T47168_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCLIV_024340
RRM
51
121
IFIGGLDVRLTEGDIIIVFSQWGEPVDIHLVRDRKTGVPKGFCFLAYEDQRSTILAVDNANGMKLLNSTLR
Links
Other
RRM
family RBPs
Other
Neospora caninum
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.704
CMU_016700
Cryptosporidium muris
CMU_016700
N
0.732
EDO06867.1
Babesia bovis
EDO06867.1
N
0.704
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.704
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.718
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.718
PBANKA_080580
Plasmodium berghei
PBANKA_080580
N
0.732
PCHAS_080610
Plasmodium chabaudi
PCHAS_080610
N
0.732
PFC0865w
Plasmodium falciparum
PFC0865w
N
0.704
PKH_082150
Plasmodium knowlesi
PKH_082150
N
0.704
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.718
PVX_095260
Plasmodium vivax
PVX_095260
N
0.704
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.704
TA19570
Theileria annulata
TA19570
N
0.704
TP01_0238
Theileria parva
TP01_0238
N
0.704
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.704
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.704