Aqu1.225190 (Amphimedon queenslandica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Aqu1.225190 T49023_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPN1
M148_0.6 		Homo sapiens ARAAGA RNAcompete
Ray et al.(2013)
RNCMPT00157 		0.771
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.225190 RRM 153 222

Links

Other RRM family RBPs
Other Amphimedon queenslandica RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cd36_04540 Candida dubliniensis Cd36_04540 N 0.000
CLUG_00492 Candida lusitaniae CLUG_00492 N 0.000
CPAG_03622 Candida parapsilosis CPAG_03622 N 0.000
CTRG_04482 Candida tropicalis CTRG_04482 N 0.000
DEHA0D03344g Debaryomyces hansenii DEHA0D03344g N 0.000
e_gwh1.1.1.1876.1 Pichia stipitis e_gwh1.1.1.1876.1 N 0.000
LELG_01795 Lodderomyces elongisporus LELG_01795 N 0.000
PGUG_05130 Candida guilliermondii PGUG_05130 N 0.000