CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CLUG_00492
(
Candida lusitaniae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CLUG_00492
T28708_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CLUT_00492
RRM
44
114
VYVGNLTHFTTEEQIHELFSKCGTIDRIIMGLDRNKLTPCGFCFVIYKDEEGSLNAMKYLKGTYLDGQSLE
Links
Other
RRM
family RBPs
Other
Candida lusitaniae
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DEHA0D03344g
Debaryomyces hansenii
DEHA0D03344g
N
0.887
e_gwh1.1.1.1876.1
Pichia stipitis
e_gwh1.1.1.1876.1
N
0.859
PGUG_05130
Candida guilliermondii
PGUG_05130
N
0.859
orf19.763
Candida albicans
orf19.763
N
0.831
Cd36_04540
Candida dubliniensis
Cd36_04540
N
0.817
LELG_01795
Lodderomyces elongisporus
LELG_01795
N
0.817
CTRG_04482
Candida tropicalis
CTRG_04482
N
0.817
CPAG_03622
Candida parapsilosis
CPAG_03622
N
0.803