MDP0000235584 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000235584 T57471_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000235584 RRM 220 285
MDP0000235584 RRM 305 370

Links

Other RRM family RBPs
Other Malus x domestica RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30128.m008555 Ricinus communis 30128.m008555 N 0.765
B9IFK9_POPTR Populus trichocarpa POPTR_0015s11730 N 0.774
cassava6430.valid.m1 Manihot esculenta cassava6430.valid.m1 N 0.780
cassava6431.valid.m1 Manihot esculenta cassava6431.valid.m1 N 0.780
Cucsa.047430 Cucumis sativus Cucsa.047430 N 0.765
Cucsa.185450 Cucumis sativus Cucsa.185450 N 0.803
Glyma04g37810.1 Glycine max Glyma04g37810.1 N 0.720
Glyma06g17250.1 Glycine max Glyma06g17250.1 N 0.720
GSVIVG00000782001 Vitis vinifera GSVIVG00000782001 N 0.803
MDP0000130792 Malus x domestica MDP0000130792 N 0.788
MDP0000276328 Malus x domestica MDP0000276328 N 0.955
Medtr4g152330 Medicago truncatula Medtr4g152330 N 0.750
PDK_20s1383501g002 Phoenix dactylifera PDK_20s1383501g002 N 0.750
PDK_20s1502541g003 Phoenix dactylifera PDK_20s1502541g003 N 0.803