PDK_20s1502541g003 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1502541g003 T58169_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1502541g003 RRM 397 462
PDK_20s1502541g003 RRM 482 547

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.185450 Cucumis sativus Cucsa.185450 N 0.924
GSVIVG00000782001 Vitis vinifera GSVIVG00000782001 N 0.909
cassava6431.valid.m1 Manihot esculenta cassava6431.valid.m1 N 0.894
cassava6430.valid.m1 Manihot esculenta cassava6430.valid.m1 N 0.894
B9IFK9_POPTR Populus trichocarpa POPTR_0015s11730 N 0.865
Cucsa.047430 Cucumis sativus Cucsa.047430 N 0.864
PDK_20s1383501g002 Phoenix dactylifera PDK_20s1383501g002 N 0.848
MDP0000130792 Malus x domestica MDP0000130792 N 0.833
MDP0000276328 Malus x domestica MDP0000276328 N 0.818
MDP0000235584 Malus x domestica MDP0000235584 N 0.803
30128.m008555 Ricinus communis 30128.m008555 N 0.795
Medtr4g152330 Medicago truncatula Medtr4g152330 N 0.735
Glyma06g17250.1 Glycine max Glyma06g17250.1 N 0.735
Glyma04g37810.1 Glycine max Glyma04g37810.1 N 0.727
PDK_20s1302211g003 Phoenix dactylifera PDK_20s1302211g003 N 0.705