ppa024222m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa024222m T58512_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa024222m RRM 6 72

Links

Other RRM family RBPs
Other Prunus persica RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29682.m000595 Ricinus communis 29682.m000595 N 0.716
30073.m002271 Ricinus communis 30073.m002271 N 0.791
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.746
AT4G17720 Arabidopsis thaliana AT4G17720-TAIR-G N 0.706
AT5G46870 Arabidopsis thaliana AT5G46870-TAIR-G N 0.701
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.701
cassava25244.valid.m1 Manihot esculenta cassava25244.valid.m1 N 0.710
cassava25245.valid.m1 Manihot esculenta cassava25245.valid.m1 N 0.721
Cucsa.318780 Cucumis sativus Cucsa.318780 N 0.731
GSVIVG00013098001 Vitis vinifera GSVIVG00013098001 N 0.761
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.761
MDP0000177505 Malus x domestica MDP0000177505 N 0.866
MDP0000596287 Malus x domestica MDP0000596287 N 0.716
Medtr5g029540 Medicago truncatula Medtr5g029540 N 0.701
Medtr8g077770 Medicago truncatula Medtr8g077770 N 0.731
mgf007506m Mimulus guttatus mgf007506m N 0.746
PK05006.1 Cannabis sativa PK05006.1 N 0.761
PK12998.1 Cannabis sativa PK12998.1 N 0.710
XM_002865109.1 Arabidopsis lyrata Al_scaffold_0008_128 N 0.701
XM_002867996.1 Arabidopsis lyrata fgenesh2_kg.7__2538__AT4G17720.1 N 0.706