Smp_064590 (Schistosoma mansoni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Smp_064590 T58634_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Smp_064590.1 RRM 106 175
Smp_064590.1 RRM 205 275
Smp_064590.1 RRM 381 436
Smp_064590.3 RRM 1 39
Smp_064590.3 RRM 69 139
Smp_064590.3 RRM 245 300

Links

Other RRM family RBPs
Other Schistosoma mansoni RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAB26047 Xenopus laevis AAB26047 I 0.000
AAH44711 Xenopus laevis AAH44711 I 0.000
Ame_R002812 Ailuropoda melanoleuca Ame_R002812 I 0.000
D3ZJL5_RAT Rattus norvegicus ENSRNOG00000029014 I 0.000
ENSCPOG00000005024 Cavia porcellus ENSCPOG00000005024 I 0.000
ENSMMUG00000018871 Macaca mulatta ENSMMUG00000018871 I 0.000
ENSMODG00000008402 Monodelphis domestica ENSMODG00000008402 I 0.000
ENSOCUG00000025925 Oryctolagus cuniculus ENSOCUG00000025925 I 0.000
ENSPPYG00000013626 Pongo pygmaeus ENSPPYG00000013626 I 0.000
ENSPPYG00000019327 Pongo pygmaeus ENSPPYG00000019327 I 0.000
ENSRNOG00000013016 Rattus norvegicus ENSRNOG00000013016 I 0.000
ENSTTRG00000004906 Tursiops truncatus ENSTTRG00000004906 I 0.000
Gm7964 Mus musculus ENSMUSG00000063902 I 0.000
HNRNPK Procavia capensis ENSPCAG00000016196 I 0.000
HNRNPK Oryzias latipes ENSORLG00000005161 I 0.000
HNRNPK Pan troglodytes ENSPTRG00000021061 I 0.000
HNRNPK Oryzias latipes ENSORLG00000004704 I 0.000
HNRNPK Pteropus vampyrus ENSPVAG00000009078 I 0.000
HNRNPK Tarsius syrichta ENSTSYG00000001196 I 0.000
Hnrnpk Rattus norvegicus ENSRNOG00000019113 I 0.000
hnrnpk Xenopus tropicalis ENSXETG00000011722 I 0.000
HNRNPK Vicugna pacos ENSVPAG00000001865 N 0.000
HNRNPK Tursiops truncatus ENSTTRG00000016693 I 0.000
HNRNPK Gasterosteus aculeatus ENSGACG00000007581 I 0.000
HNRNPK Takifugu rubripes ENSTRUG00000010659 I 0.000
HNRNPK Takifugu rubripes ENSTRUG00000000535 I 0.000
HNRNPK Tetraodon nigroviridis ENSTNIG00000007554 I 0.000
HNRNPK Tetraodon nigroviridis ENSTNIG00000006005 I 0.000
HNRNPK Taeniopygia guttata ENSTGUG00000003138 I 0.000
HNRNPK Tupaia belangeri ENSTBEG00000001289 I 0.000
HNRNPK Ochotona princeps ENSOPRG00000015723 I 0.000
HNRNPK Otolemur garnettii ENSOGAG00000007478 I 0.000
HNRNPK Anolis carolinensis ENSACAG00000001479 I 0.000
hnRNPK Homo sapiens ENSG00000165119 D 0.000
HNRNPK Felis catus ENSFCAG00000014862 I 0.000
HNRNPK Echinops telfairi ENSETEG00000016294 I 0.000
HNRNPK Erinaceus europaeus ENSEEUG00000014624 I 0.000
HNRNPK Equus caballus ENSECAG00000025104 I 0.000
hnrnpk Danio rerio ENSDARG00000018914 I 0.000
HNRNPK Callithrix jacchus ENSCJAG00000003750 I 0.000
HNRNPK Choloepus hoffmanni ENSCHOG00000010832 I 0.000
HNRNPK Gallus gallus ENSGALG00000012591 I 0.000
Hnrnpk Mus musculus ENSMUSG00000021546 I 0.000
HNRNPK Gorilla gorilla ENSGGOG00000015500 I 0.000
HNRNPK Loxodonta africana ENSLAFG00000026567 I 0.000
HNRNPK Macropus eugenii ENSMEUG00000006975 I 0.000
HNRNPK Microcebus murinus ENSMICG00000015780 N 0.000
HNRNPK Monodelphis domestica ENSMODG00000018992 I 0.000
HNRNPK Myotis lucifugus ENSMLUG00000005871 I 0.000
HNRNPK Ornithorhynchus anatinus ENSOANG00000014612 I 0.000
hnrpkl Danio rerio ENSDARG00000007034 I 0.000
HNRPK_BOVIN Bos taurus ENSBTAG00000021131 I 0.000
HNRPK_CHICK Gallus gallus ENSGALG00000014366 I 0.000
HNRPK_RABIT Oryctolagus cuniculus ENSOCUG00000010364 I 0.000
XM_533511.2 Canis familiaris ENSCAFG00000001399 I 0.000
XM_855974.1 Canis familiaris ENSCAFG00000017503 I 0.000