GH13506 (Drosophila grimshawi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0120982 T43459_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0147412 RRM 273 342
FBpp0147412 RRM 371 441
FBpp0147412 RRM 538 596

Links

Other RRM family RBPs
Other Drosophila grimshawi RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GI10246 Drosophila mojavensis FBgn0133011 N 0.955
GJ18017 Drosophila virilis FBgn0205182 N 0.950
GK15272 Drosophila willistoni FBgn0217277 N 0.945
GG10454 Drosophila erecta FBgn0102763 N 0.945
GF14957 Drosophila ananassae FBgn0091982 N 0.945
GE14328 Drosophila yakuba FBgn0231943 N 0.940
CG11266 Drosophila melanogaster FBgn0031883 N 0.940
GM16278 Drosophila sechellia FBgn0171194 N 0.940
GD23448 Drosophila simulans FBgn0194830 N 0.940
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.930
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.875
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.875
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.875
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.875
AAEL005046 Aedes aegypti AAEL005046 N 0.871
AGAP008433 Anopheles gambiae AGAP008433 N 0.855
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.850
PHUM394230 Pediculus humanus PHUM394230 N 0.820
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.780
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.775
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.755
RBM39 Microcebus murinus ENSMICG00000001668 N 0.740
Rbm39 Mus musculus ENSMUSG00000027620 N 0.740
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.740
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.740
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.740
RBM39 Sorex araneus ENSSARG00000007673 N 0.740
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.740
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.740
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.740
RBM39 Sus scrofa ENSSSCG00000007309 N 0.740
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.740
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.740
RBM39 Equus caballus ENSECAG00000013423 N 0.740
rbm39a Danio rerio ENSDARG00000011613 N 0.740
RBM39 Canis familiaris ENSCAFG00000008327 N 0.740
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.740
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.740
RBM39 Homo sapiens ENSG00000131051 N 0.740
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.740
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.736
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.735
RBM39 Gallus gallus ENSGALG00000001550 N 0.735
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.735
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.730
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.730
RBM23 Oryzias latipes ENSORLG00000009919 N 0.725
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.725
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.725
rbm39b Danio rerio ENSDARG00000041853 N 0.725
AAH77813 Xenopus laevis AAH77813 N 0.720
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.720
RBM23 Oryzias latipes ENSORLG00000010370 N 0.720
Sjc_0034270 Schistosoma japonicum Sjc_0034270 N 0.715
Smp_064590 Schistosoma mansoni Smp_064590 N 0.715
AAH75146 Xenopus laevis AAH75146 N 0.710
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.705
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.705