CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ZCCHC17
(
Vicugna pacos
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSVPAG00000003834
T60588_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000003561
S1
12
85
PALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLS
Links
Other
S1
family RBPs
Other
Vicugna pacos
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R018426
Ailuropoda melanoleuca
Ame_R018426
I
0.000
ENSPPYG00000020609
Pongo pygmaeus
ENSPPYG00000020609
I
0.000
LOC100060588
Equus caballus
ENSECAG00000021846
I
0.000
LOC100405722
Callithrix jacchus
ENSCJAG00000007957
I
0.000
RBM41
Oryctolagus cuniculus
ENSOCUG00000015937
I
0.000
RBM41
Procavia capensis
ENSPCAG00000003991
I
0.000
RBM41
Pan troglodytes
ENSPTRG00000022158
I
0.000
RBM41
Pteropus vampyrus
ENSPVAG00000001786
I
0.000
Rbm41
Rattus norvegicus
ENSRNOG00000012590
I
0.000
RBM41
Sorex araneus
ENSSARG00000004377
I
0.000
RBM41
Sus scrofa
ENSSSCG00000012556
I
0.000
RBM41
Tarsius syrichta
ENSTSYG00000006980
I
0.000
RBM41
Vicugna pacos
ENSVPAG00000003647
I
0.000
Rbm41
Mus musculus
ENSMUSG00000031433
I
0.000
RBM41
Monodelphis domestica
ENSMODG00000002312
I
0.000
RBM41
Macaca mulatta
ENSMMUG00000023172
I
0.000
RBM41
Canis familiaris
ENSCAFG00000017959
I
0.000
RBM41
Dasypus novemcinctus
ENSDNOG00000013865
I
0.000
Rbm41
Dipodomys ordii
ENSDORG00000008077
I
0.000
RBM41
Erinaceus europaeus
ENSEEUG00000006722
I
0.000
RBM41
Echinops telfairi
ENSETEG00000019681
I
0.000
RBM41
Homo sapiens
ENSG00000089682
D
0.000
RBM41
Gorilla gorilla
ENSGGOG00000006587
I
0.000
RBM41
Loxodonta africana
ENSLAFG00000028266
I
0.000
RBM41
Macropus eugenii
ENSMEUG00000002663
N
0.000
RBM41
Microcebus murinus
ENSMICG00000009750
I
0.000
RBM41
Bos taurus
ENSBTAG00000000955
I
0.000