CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RBM41
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000009750
T38537_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
RBM41
M051_0.6
Homo sapiens
WUACWUK
RNAcompete
Ray et al.(2013)
RNCMPT00053
0.887
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000008874
RRM
310
380
LYLKNLSPQVTEKDLVSLFARFQEKKGPPVEFRLMTGRMRGQAFITFSNKEIACQALHLVNGYKLRGKILV
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM41
Canis familiaris
ENSCAFG00000017959
I
0.901
RBM41
Sus scrofa
ENSSSCG00000012556
I
0.901
LOC100060588
Equus caballus
ENSECAG00000021846
I
0.901
RBM41
Loxodonta africana
ENSLAFG00000028266
I
0.901
RBM41
Macaca mulatta
ENSMMUG00000023172
I
0.887
RBM41
Vicugna pacos
ENSVPAG00000003647
I
0.887
RBM41
Dasypus novemcinctus
ENSDNOG00000013865
I
0.887
RBM41
Gorilla gorilla
ENSGGOG00000006587
I
0.887
RBM41
Homo sapiens
ENSG00000089682
D
0.887
Ame_R018426
Ailuropoda melanoleuca
Ame_R018426
I
0.887
RBM41
Pan troglodytes
ENSPTRG00000022158
I
0.887
RBM41
Pteropus vampyrus
ENSPVAG00000001786
I
0.887
ENSPPYG00000020609
Pongo pygmaeus
ENSPPYG00000020609
I
0.887
RBM41
Erinaceus europaeus
ENSEEUG00000006722
I
0.873
RBM41
Bos taurus
ENSBTAG00000000955
I
0.873
RBM41
Sorex araneus
ENSSARG00000004377
I
0.859
RBM41
Oryctolagus cuniculus
ENSOCUG00000015937
I
0.859
LOC100405722
Callithrix jacchus
ENSCJAG00000007957
I
0.859
RBM41
Echinops telfairi
ENSETEG00000019681
I
0.859
RBM41
Tarsius syrichta
ENSTSYG00000006980
I
0.859
RBM41
Procavia capensis
ENSPCAG00000003991
I
0.845
Rbm41
Mus musculus
ENSMUSG00000031433
I
0.803
Rbm41
Dipodomys ordii
ENSDORG00000008077
I
0.803
RBM41
Cavia porcellus
ENSCPOG00000025052
I
0.803
Rbm41
Rattus norvegicus
ENSRNOG00000012590
I
0.789
RBM41
Macropus eugenii
ENSMEUG00000002663
N
0.789
RBM41
Monodelphis domestica
ENSMODG00000002312
I
0.761