LOC100060588 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000021846 T36694_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM41
M051_0.6 		Homo sapiens WUACWUK RNAcompete
Ray et al.(2013)
RNCMPT00053 		0.986
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000019285 RRM 311 381

Links

Other RRM family RBPs
Other Equus caballus RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM41 Pteropus vampyrus ENSPVAG00000001786 I 0.986
ENSPPYG00000020609 Pongo pygmaeus ENSPPYG00000020609 I 0.986
RBM41 Vicugna pacos ENSVPAG00000003647 I 0.986
RBM41 Canis familiaris ENSCAFG00000017959 I 0.986
RBM41 Dasypus novemcinctus ENSDNOG00000013865 I 0.986
RBM41 Macaca mulatta ENSMMUG00000023172 I 0.986
RBM41 Pan troglodytes ENSPTRG00000022158 I 0.986
RBM41 Homo sapiens ENSG00000089682 D 0.986
RBM41 Gorilla gorilla ENSGGOG00000006587 I 0.986
RBM41 Sus scrofa ENSSSCG00000012556 I 0.972
RBM41 Bos taurus ENSBTAG00000000955 I 0.972
Ame_R018426 Ailuropoda melanoleuca Ame_R018426 I 0.958
LOC100405722 Callithrix jacchus ENSCJAG00000007957 I 0.958
RBM41 Tarsius syrichta ENSTSYG00000006980 I 0.944
RBM41 Sorex araneus ENSSARG00000004377 I 0.944
RBM41 Oryctolagus cuniculus ENSOCUG00000015937 I 0.944
RBM41 Loxodonta africana ENSLAFG00000028266 I 0.944
RBM41 Procavia capensis ENSPCAG00000003991 I 0.944
RBM41 Echinops telfairi ENSETEG00000019681 I 0.930
RBM41 Erinaceus europaeus ENSEEUG00000006722 I 0.915
RBM41 Cavia porcellus ENSCPOG00000025052 I 0.901
Rbm41 Mus musculus ENSMUSG00000031433 I 0.901
RBM41 Microcebus murinus ENSMICG00000009750 I 0.901
Rbm41 Rattus norvegicus ENSRNOG00000012590 I 0.887
Rbm41 Dipodomys ordii ENSDORG00000008077 I 0.831
RBM41 Macropus eugenii ENSMEUG00000002663 N 0.831
RBM41 Monodelphis domestica ENSMODG00000002312 I 0.803