CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GE20687
(
Drosophila yakuba
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
FBgn0237992
T62199_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0265697
YTH
298
394
LIFSVNESGKFAGFARMAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIGRDGQEIEPKIGGELCRLFPED
Links
Other
YTH
family RBPs
Other
Drosophila yakuba
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL002272
Aedes aegypti
AAEL002272
N
0.753
AGAP005940
Anopheles gambiae
AGAP005940
N
0.722
amel4_ncbi_hmm4222
Apis mellifera
amel4_ncbi_hmm4222
I
0.732
BGIBMGA011690
Bombyx mori
BGIBMGA011690
N
0.742
CPIJ007352
Culex quinquefasciatus
CPIJ007352
N
0.753
CpipJ_CPIJ007352
Culex pipiens
CpipJ_CPIJ007352
N
0.753
GA28277-RA
Drosophila pseudoobscura
FBgn0249640
N
1.000
GD13329
Drosophila simulans
FBgn0185047
N
1.000
GF10271
Drosophila ananassae
FBgn0087312
N
0.979
GG14260
Drosophila erecta
FBgn0106521
N
1.000
GH15361
Drosophila grimshawi
FBgn0122833
N
0.897
GH24419
Drosophila grimshawi
FBgn0131875
N
0.897
GI12962
Drosophila mojavensis
FBgn0135719
N
0.990
GJ13107
Drosophila virilis
FBgn0200334
N
0.979
GK20378
Drosophila willistoni
FBgn0222375
N
0.990
GM14053
Drosophila sechellia
FBgn0168982
N
1.000
nasonia_NCBI_hmm460384
Nasonia vitripennis
nasonia_NCBI_hmm460384
I
0.722
PHUM305930
Pediculus humanus
PHUM305930
I
0.753
YT521-B
Drosophila melanogaster
FBgn0027616
N
1.000