CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK20378
(
Drosophila willistoni
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
FBgn0222375
T62197_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0249521
YTH
289
385
LIFSVNESGKFAGFARMAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNSWNEGKPVKIGRDGQEIEPKIGGELCRLFPED
Links
Other
YTH
family RBPs
Other
Drosophila willistoni
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GE20687
Drosophila yakuba
FBgn0237992
N
0.990
YT521-B
Drosophila melanogaster
FBgn0027616
N
0.990
GF10271
Drosophila ananassae
FBgn0087312
N
0.990
GG14260
Drosophila erecta
FBgn0106521
N
0.990
GM14053
Drosophila sechellia
FBgn0168982
N
0.990
GA28277-RA
Drosophila pseudoobscura
FBgn0249640
N
0.990
GJ13107
Drosophila virilis
FBgn0200334
N
0.990
GD13329
Drosophila simulans
FBgn0185047
N
0.990
GI12962
Drosophila mojavensis
FBgn0135719
N
0.979
GH15361
Drosophila grimshawi
FBgn0122833
N
0.907
GH24419
Drosophila grimshawi
FBgn0131875
N
0.907
PHUM305930
Pediculus humanus
PHUM305930
I
0.763
CPIJ007352
Culex quinquefasciatus
CPIJ007352
N
0.753
CpipJ_CPIJ007352
Culex pipiens
CpipJ_CPIJ007352
N
0.753
AAEL002272
Aedes aegypti
AAEL002272
N
0.753
BGIBMGA011690
Bombyx mori
BGIBMGA011690
N
0.742
amel4_ncbi_hmm4222
Apis mellifera
amel4_ncbi_hmm4222
I
0.732
nasonia_NCBI_hmm460384
Nasonia vitripennis
nasonia_NCBI_hmm460384
I
0.722
AGAP005940
Anopheles gambiae
AGAP005940
N
0.722