nasonia_NCBI_hmm460384 (Nasonia vitripennis)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 nasonia_NCBI_hmm460384 T61920_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YTHDC1
M354_0.6 		Homo sapiens KVVURC SELEX
Cook et al.(2011)
969_20167602 		0.701
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm460384 YTH 177 273

Links

Other YTH family RBPs
Other Nasonia vitripennis RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm4222 Apis mellifera amel4_ncbi_hmm4222 I 0.969
BGIBMGA011690 Bombyx mori BGIBMGA011690 N 0.856
PHUM305930 Pediculus humanus PHUM305930 I 0.856
AAEL002272 Aedes aegypti AAEL002272 N 0.794
CpipJ_CPIJ007352 Culex pipiens CpipJ_CPIJ007352 N 0.794
CPIJ007352 Culex quinquefasciatus CPIJ007352 N 0.794
AGAP005940 Anopheles gambiae AGAP005940 N 0.784
GH24419 Drosophila grimshawi FBgn0131875 N 0.732
GH15361 Drosophila grimshawi FBgn0122833 N 0.732
XP_001181366.1 Strongylocentrotus purpuratus XP_001181366.1 I 0.732
XP_783255.2 Strongylocentrotus purpuratus XP_783255.2 I 0.732
GM14053 Drosophila sechellia FBgn0168982 N 0.722
GI12962 Drosophila mojavensis FBgn0135719 N 0.722
GG14260 Drosophila erecta FBgn0106521 N 0.722
GF10271 Drosophila ananassae FBgn0087312 N 0.722
GD13329 Drosophila simulans FBgn0185047 N 0.722
GE20687 Drosophila yakuba FBgn0237992 N 0.722
PASA_GEN_12100033 Daphnia pulex PASA_GEN_12100033 N 0.722
ythdc1 Danio rerio ENSDARG00000051953 I 0.722
GJ13107 Drosophila virilis FBgn0200334 N 0.722
YT521-B Drosophila melanogaster FBgn0027616 N 0.722
GK20378 Drosophila willistoni FBgn0222375 N 0.722
GA28277-RA Drosophila pseudoobscura FBgn0249640 N 0.722
e_gw.768.2.1 Branchiostoma floridae e_gw.768.2.1 N 0.701
YTHDC1 Tupaia belangeri ENSTBEG00000011546 I 0.701
YTHDC1 Homo sapiens ENSG00000083896 D 0.701
Q5F341_CHICK Gallus gallus ENSGALG00000011795 I 0.701
YTHDC1 Gorilla gorilla ENSGGOG00000021958 I 0.701
YTHDC1 Erinaceus europaeus ENSEEUG00000015466 I 0.701
Ythdc1 Dipodomys ordii ENSDORG00000013045 I 0.701
Q29RQ7_BOVIN Bos taurus ENSBTAG00000015572 I 0.701
YTHDC1 Callithrix jacchus ENSCJAG00000009934 I 0.701
YTHDC1 Cavia porcellus ENSCPOG00000010929 I 0.701
YTHDC1 Meleagris gallopavo ENSMGAG00000010391 I 0.701
YTHDC1 Macaca mulatta ENSMMUG00000002265 I 0.701
Ythdc1 Rattus norvegicus ENSRNOG00000001996 I 0.701
YTHDC1 Sorex araneus ENSSARG00000010960 I 0.701
YTHDC1 Taeniopygia guttata ENSTGUG00000004452 I 0.701
YTHDC1 Pteropus vampyrus ENSPVAG00000015551 I 0.701
YTHDC1 Pan troglodytes ENSPTRG00000016105 I 0.701
Ythdc1 Mus musculus ENSMUSG00000035851 I 0.701
YTHDC1 Ochotona princeps ENSOPRG00000008986 I 0.701
ENSPPYG00000014726 Pongo pygmaeus ENSPPYG00000014726 I 0.701
YTHDC1 Vicugna pacos ENSVPAG00000009040 I 0.701