estExt_Genewise1Plus.C_470172 (Capitella teleta)
CCCH ZF,CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00098 (zf-CCHC) 		IPR000571
IPR001878 		estExt_Genewise1Plus.C_470172 T00119_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_470172 CCCH ZF 36 61
estExt_Genewise1Plus.C_470172 CCCH ZF 63 88
estExt_Genewise1Plus.C_470172 CCCH ZF 91 116
estExt_Genewise1Plus.C_470172 CCCH ZF 119 139
estExt_Genewise1Plus.C_470172 CCCH ZF 144 168
estExt_Genewise1Plus.C_470172 CCHC ZF 185 202
estExt_Genewise1Plus.C_470172 CCHC ZF 235 252

Links

Other CCCH ZF,CCHC ZF family RBPs
Other Capitella teleta RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pg.C_1120028 Branchiostoma floridae estExt_fgenesh2_pg.C_1120028 N 0.725
estExt_fgenesh2_pg.C_170094 Branchiostoma floridae estExt_fgenesh2_pg.C_170094 N 0.725
ISCW021476 Ixodes scapularis ISCW021476 N 0.728
e_gw1.98.132.1 Lottia gigantea e_gw1.98.132.1 N 0.758