CPSF4 (Callithrix jacchus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSCJAG00000015826 T02369_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000029160 CCCH ZF 36 60
ENSCJAP00000029160 CCCH ZF 63 88
ENSCJAP00000029160 CCCH ZF 91 116
ENSCJAP00000029160 CCCH ZF 119 140
ENSCJAP00000029160 CCCH ZF 143 168

Links

Other CCCH ZF family RBPs
Other Callithrix jacchus RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R012658 Ailuropoda melanoleuca Ame_R012658 N 1.000
BGIBMGA011920 Bombyx mori BGIBMGA011920 N 0.758
CPSF4 Echinops telfairi ENSETEG00000002608 N 0.960
CPSF4 Felis catus ENSFCAG00000015070 N 1.000
CPSF4L Loxodonta africana ENSLAFG00000010697 N 0.703
CPSF4L Monodelphis domestica ENSMODG00000025672 N 0.715
Cpsf4 Mus musculus ENSMUSG00000029625 N 1.000
gw.91.110.1 Nematostella vectensis gw.91.110.1 N 0.794
PHUM519380 Pediculus humanus PHUM519380 N 0.780
CPSF4_RAT Rattus norvegicus ENSRNOG00000000985 N 1.000
ENSTSYG00000008195 Tarsius syrichta ENSTSYG00000008195 N 0.912
CPSF4 Tursiops truncatus ENSTTRG00000003007 N 1.000