29838.m001638 (Ricinus communis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 29838.m001638 T04684_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
29838.m001638 CCCH ZF 491 512
29838.m001638 CCCH ZF 516 541
29838.m001638 CCCH ZF 545 567

Links

Other CCCH ZF family RBPs
Other Ricinus communis RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK20740.1 Cannabis sativa PK20740.1 N 0.760
Cucsa.018350 Cucumis sativus Cucsa.018350 N 0.716
Glyma14g39390.1 Glycine max Glyma14g39390.1 N 0.722
cassava30352.valid.m1 Manihot esculenta cassava30352.valid.m1 N 0.813
ppa001043m Prunus persica ppa001043m N 0.707
GSVIVG00015184001 Vitis vinifera GSVIVG00015184001 N 0.716