Glyma01g10610.1 (Glycine max)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Glyma01g10610.1 T05385_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma01g10610.1 CCCH ZF 93 118
Glyma01g10610.1 CCCH ZF 158 184
Glyma01g10610.1 CCCH ZF 236 262

Links

Other CCCH ZF family RBPs
Other Glycine max RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002890939.1 Arabidopsis lyrata scaffold_103602.1 N 0.925
AT1G32360 Arabidopsis thaliana AT1G32360-TAIR-G N 0.925
BRADI3G16360 Brachypodium distachyon BRADI3G16360 N 0.938
BRADI3G16377 Brachypodium distachyon BRADI3G16377 N 0.938
PK04103.1 Cannabis sativa PK04103.1 N 0.950
Cucsa.312990 Cucumis sativus Cucsa.312990 N 0.988
chr4.LjT10E08.110.nc Lotus japonicus chr4.LjT10E08.110.nc N 0.988
MDP0000209929 Malus x domestica MDP0000209929 N 0.925
MDP0000706016 Malus x domestica MDP0000706016 N 0.938
cassava5467.m1 Manihot esculenta cassava5467.m1 N 0.963
cassava25690.m1 Manihot esculenta cassava25690.m1 N 0.975
Medtr8g078060 Medicago truncatula Medtr8g078060 N 0.975
mgf012162m Mimulus guttatus mgf012162m N 0.938
mgf003951m Mimulus guttatus mgf003951m N 0.912
mgf004101m Mimulus guttatus mgf004101m N 0.912
BGIOSIBCE026569 Oryza indica BGIOSIBCE026569 N 0.925
LOC_Os08g06330 Oryza sativa LOC_Os08g06330 N 0.925
B9GZ92_POPTR Populus trichocarpa POPTR_0003s09240 N 0.963
B9MU37_POPTR Populus trichocarpa POPTR_0001s02330 N 0.950
ppa008182m Prunus persica ppa008182m N 0.938
30054.m000804 Ricinus communis 30054.m000804 N 0.975
gw1.11.272.1 Selaginella moellendorfii gw1.11.272.1 N 0.713
GSVIVG00013136001 Vitis vinifera GSVIVG00013136001 N 0.925