gw1.11.272.1 (Selaginella moellendorfii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 gw1.11.272.1 T05504_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.11.272.1 CCCH ZF 6 31
gw1.11.272.1 CCCH ZF 59 84
gw1.11.272.1 CCCH ZF 106 132

Links

Other CCCH ZF family RBPs
Other Selaginella moellendorfii RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_430142 Physcomitrella patens estExt_fgenesh1_pg.C_430142 N 0.785
BRADI3G16377 Brachypodium distachyon BRADI3G16377 N 0.725
B9MU37_POPTR Populus trichocarpa POPTR_0001s02330 N 0.725
cassava5467.m1 Manihot esculenta cassava5467.m1 N 0.725
AT1G32360 Arabidopsis thaliana AT1G32360-TAIR-G N 0.725
XM_002890939.1 Arabidopsis lyrata scaffold_103602.1 N 0.725
BRADI3G16360 Brachypodium distachyon BRADI3G16360 N 0.725
LOC_Os08g06330 Oryza sativa LOC_Os08g06330 N 0.713
mgf012162m Mimulus guttatus mgf012162m N 0.713
B9GZ92_POPTR Populus trichocarpa POPTR_0003s09240 N 0.713
cassava25690.m1 Manihot esculenta cassava25690.m1 N 0.713
Cucsa.312990 Cucumis sativus Cucsa.312990 N 0.713
mgf003951m Mimulus guttatus mgf003951m N 0.713
Glyma01g10610.1 Glycine max Glyma01g10610.1 N 0.713
mgf004101m Mimulus guttatus mgf004101m N 0.713
BGIOSIBCE026569 Oryza indica BGIOSIBCE026569 N 0.713
30054.m000804 Ricinus communis 30054.m000804 N 0.713
chr4.LjT10E08.110.nc Lotus japonicus chr4.LjT10E08.110.nc N 0.700
PK04103.1 Cannabis sativa PK04103.1 N 0.700
MDP0000706016 Malus x domestica MDP0000706016 N 0.700
MDP0000209929 Malus x domestica MDP0000209929 N 0.700
ppa008182m Prunus persica ppa008182m N 0.700
Medtr8g078060 Medicago truncatula Medtr8g078060 N 0.700