Sjc_0049010 (Schistosoma japonicum)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Sjc_0049010 T05820_0.6 SDSPB (2008-Sep-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000004617 CCCH ZF 171 196
CPRT0000004617 CCCH ZF 258 278

Links

Other CCCH ZF family RBPs
Other Schistosoma japonicum RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010535 Aedes aegypti AAEL010535 N 0.766
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.745
AGAP008634 Anopheles gambiae AGAP008634 N 0.766
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.745
fgenesh2_pg.scaffold_616000019 Branchiostoma floridae fgenesh2_pg.scaffold_616000019 N 0.755
Cd36_81440 Candida dubliniensis Cd36_81440 N 0.729
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.809
GF12572 Drosophila ananassae FBgn0089609 N 0.787
GG10627 Drosophila erecta FBgn0102935 N 0.787
GH21804 Drosophila grimshawi FBgn0129265 N 0.809
CG8635 Drosophila melanogaster FBgn0033317 N 0.787
GI20775 Drosophila mojavensis FBgn0143510 N 0.787
GL11672 Drosophila persimilis FBgn0149281 N 0.809
GA21225-RA Drosophila pseudoobscura FBgn0081213 N 0.809
GM20672 Drosophila sechellia FBgn0175554 N 0.787
GJ20510 Drosophila virilis FBgn0207650 N 0.787
GE22859 Drosophila yakuba FBgn0240063 N 0.787
estExt_fgenesh2_pm.C_110045 Heterobasidion annosum estExt_fgenesh2_pm.C_110045 N 0.702
e_gwh1.21.47.1 Laccaria bicolor e_gwh1.21.47.1 N 0.723
mgf000781m Mimulus guttatus mgf000781m N 0.723
EEB90926.1 Moniliophthora perniciosa EEB90926.1 N 0.702
XP_002493623.1 Pichia pastoris XP_002493623.1 N 0.787
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.745
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.723
RO3G_08915 Rhizopus oryzae RO3G_08915 N 0.750
Smp_099900 Schistosoma mansoni Smp_099900 N 0.957
estExt_fgenesh1_pm.C_120035 Schizophyllum commune estExt_fgenesh1_pm.C_120035 N 0.723
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.723
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.787
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.787