chr4.LjT10E08.110.nc (Lotus japonicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 chr4.LjT10E08.110.nc T06004_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
chr4.LjT10E08.110.nc CCCH ZF 99 124
chr4.LjT10E08.110.nc CCCH ZF 173 199
chr4.LjT10E08.110.nc CCCH ZF 262 288

Links

Other CCCH ZF family RBPs
Other Lotus japonicus RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Genemark.10526_g Serpula lacrymans Genemark.10526_g N 0.000
Genemark.3124_g Serpula lacrymans Genemark.3124_g N 0.000
Genemark.446_g Serpula lacrymans Genemark.446_g N 0.000
Genemark.469_g Serpula lacrymans Genemark.469_g N 0.000
Genemark.4749_g Serpula lacrymans Genemark.4749_g N 0.000
Genemark.4999_g Serpula lacrymans Genemark.4999_g N 0.000
Genemark.618_g Serpula lacrymans Genemark.618_g N 0.000
Genemark.7257_g Serpula lacrymans Genemark.7257_g N 0.000
Genemark.8882_g Serpula lacrymans Genemark.8882_g N 0.000
Genemark.3014_g Serpula lacrymans Genemark.3014_g N 0.000
Genemark.2652_g Serpula lacrymans Genemark.2652_g N 0.000
Genemark.10975_g Serpula lacrymans Genemark.10975_g N 0.000
Genemark.11049_g Serpula lacrymans Genemark.11049_g N 0.000
Genemark.11600_g Serpula lacrymans Genemark.11600_g N 0.000
Genemark.12016_g Serpula lacrymans Genemark.12016_g N 0.000
Genemark.12031_g Serpula lacrymans Genemark.12031_g N 0.000
Genemark.12122_g Serpula lacrymans Genemark.12122_g N 0.000
Genemark.12199_g Serpula lacrymans Genemark.12199_g N 0.000
Genemark.1877_g Serpula lacrymans Genemark.1877_g N 0.000
Genemark.940_g Serpula lacrymans Genemark.940_g N 0.000