CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZYRO0G10956g
(
Zygosaccharomyces rouxii
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ZYRO0G10956g
T06686_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZYRO0G10956g
CCCH ZF
115
139
PDVCKDFKQTGYCGYGDSCKFLHSR
Links
Other
CCCH ZF
family RBPs
Other
Zygosaccharomyces rouxii
RBPs
219 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R009995
Ailuropoda melanoleuca
Ame_R009995
I
0.000
ZCRB1
Anolis carolinensis
ENSACAG00000003172
I
0.000
ZCRB1_BOVIN
Bos taurus
ENSBTAG00000019119
I
0.000
LOC100410115
Callithrix jacchus
ENSCJAG00000017749
I
0.000
ZCRB1
Cavia porcellus
ENSCPOG00000014554
I
0.000
LOC100049989
Equus caballus
ENSECAG00000012174
I
0.000
ZCRB1
Gorilla gorilla
ENSGGOG00000015647
I
0.000
ZCRB1
Homo sapiens
ENSG00000139168
D
0.000
e_gw1.93.90.1
Lottia gigantea
e_gw1.93.90.1
I
0.000
ZCRB1
Loxodonta africana
ENSLAFG00000008847
I
0.000
ENSMODG00000008893
Monodelphis domestica
ENSMODG00000008893
I
0.000
XM_001371517.1
Monodelphis domestica
ENSMODG00000006493
I
0.000
ZCRB1
Oryzias latipes
ENSORLG00000013088
I
0.000
ZCRB1
Pan troglodytes
ENSPTRG00000004838
I
0.000
ENSPPYG00000004422
Pongo pygmaeus
ENSPPYG00000004422
I
0.000
ZCRB1
Takifugu rubripes
ENSTRUG00000016764
I
0.000
ZCRB1
Tetraodon nigroviridis
ENSTNIG00000018504
I
0.000
ZCRB1
Vicugna pacos
ENSVPAG00000012040
I
0.000