e_gw1.93.90.1 (Lottia gigantea)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		e_gw1.93.90.1 T07532_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.742
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.93.90.1 RRM 17 87
e_gw1.93.90.1 CCHC ZF 110 127

Links

Other CCHC ZF,RRM family RBPs
Other Lottia gigantea RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCRB1 Oryzias latipes ENSORLG00000013088 I 0.798
fgenesh1_pg.C_scaffold_178000001 Capitella teleta fgenesh1_pg.C_scaffold_178000001 I 0.798
ZCRB1 Tetraodon nigroviridis ENSTNIG00000018504 I 0.787
ZCRB1 Takifugu rubripes ENSTRUG00000016764 I 0.775
zcrb1 Danio rerio ENSDARG00000045691 I 0.775
ZCRB1 Gasterosteus aculeatus ENSGACG00000018860 I 0.775
ENSMODG00000008893 Monodelphis domestica ENSMODG00000008893 I 0.764
XM_001371517.1 Monodelphis domestica ENSMODG00000006493 I 0.764
estExt_fgenesh2_pg.C_670012 Branchiostoma floridae estExt_fgenesh2_pg.C_670012 I 0.764
ZCRB1 Anolis carolinensis ENSACAG00000003172 I 0.764
estExt_GenewiseH_1.C_3120062 Branchiostoma floridae estExt_GenewiseH_1.C_3120062 I 0.764
ZCRB1 Loxodonta africana ENSLAFG00000008847 I 0.753
ZCRB1 Gallus gallus ENSGALG00000009544 I 0.753
ZCRB1 Taeniopygia guttata ENSTGUG00000005829 I 0.753
ZCRB1 Meleagris gallopavo ENSMGAG00000009450 I 0.753
Zcrb1 Mus musculus ENSMUSG00000022635 I 0.742
ZCRB1 Pan troglodytes ENSPTRG00000004838 I 0.742
ZCRB1 Vicugna pacos ENSVPAG00000012040 I 0.742
zcrb1 Xenopus tropicalis ENSXETG00000006796 I 0.742
ZCRB1 Tursiops truncatus ENSTTRG00000001378 I 0.742
Zcrb1 Rattus norvegicus ENSRNOG00000004996 I 0.742
ENSPPYG00000004422 Pongo pygmaeus ENSPPYG00000004422 I 0.742
ZCRB1 Ornithorhynchus anatinus ENSOANG00000009891 I 0.742
ZCRB1 Gorilla gorilla ENSGGOG00000015647 I 0.742
ZCRB1 Homo sapiens ENSG00000139168 D 0.742
Q6DJI9 Xenopus laevis Q6DJI9 I 0.742
AAH75189 Xenopus laevis AAH75189 I 0.742
Ame_R009995 Ailuropoda melanoleuca Ame_R009995 I 0.742
ZCRB1 Canis familiaris ENSCAFG00000009788 I 0.742
ZCRB1_BOVIN Bos taurus ENSBTAG00000019119 I 0.742
LOC100410115 Callithrix jacchus ENSCJAG00000017749 I 0.742
LOC100049989 Equus caballus ENSECAG00000012174 I 0.742
ZCRB1 Cavia porcellus ENSCPOG00000014554 I 0.742
ENSOCUG00000026539 Oryctolagus cuniculus ENSOCUG00000026539 I 0.730
DGIL_AUG5s13030g1t1 Acyrtosiphon pisum DGIL_AUG5s13030g1t1 N 0.730
ZCRB1 Procavia capensis ENSPCAG00000011749 I 0.719
78261 Helobdella robusta 78261 N 0.719
estExt_gwp.C_1220057 Nematostella vectensis estExt_gwp.C_1220057 I 0.708
estExt_Genewise1.C_12029 Trichoplax adhaerens estExt_Genewise1.C_12029 N 0.708