LOC_Os04g02960 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os04g02960 T11111_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g02960.1 CCHC ZF 1614 1631

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

157 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExtDG_fgeneshEH_pg.C_710018 Emiliania huxleyi estExtDG_fgeneshEH_pg.C_710018 N 0.722
estExtDG_fgeneshEH_pg.C_1020080 Emiliania huxleyi estExtDG_fgeneshEH_pg.C_1020080 N 0.722
LOC_Os08g23480 Oryza sativa LOC_Os08g23480 N 0.944
LOC_Os08g34440 Oryza sativa LOC_Os08g34440 N 0.944
LOC_Os08g36160 Oryza sativa LOC_Os08g36160 N 0.944
LOC_Os09g06350 Oryza sativa LOC_Os09g06350 N 0.944
LOC_Os09g07740 Oryza sativa LOC_Os09g07740 N 0.944
LOC_Os09g08310 Oryza sativa LOC_Os09g08310 N 0.889
LOC_Os09g13800 Oryza sativa LOC_Os09g13800 N 0.944
LOC_Os09g21020 Oryza sativa LOC_Os09g21020 N 0.944
LOC_Os10g18190 Oryza sativa LOC_Os10g18190 N 0.889
LOC_Os10g30832 Oryza sativa LOC_Os10g30832 N 0.944
LOC_Os11g29074 Oryza sativa LOC_Os11g29074 N 0.944
LOC_Os11g31970 Oryza sativa LOC_Os11g31970 N 0.944
LOC_Os08g19250 Oryza sativa LOC_Os08g19250 N 0.944
LOC_Os06g29300 Oryza sativa LOC_Os06g29300 N 0.944
LOC_Os06g25270 Oryza sativa LOC_Os06g25270 N 0.944
LOC_Os02g13910 Oryza sativa LOC_Os02g13910 N 0.944
LOC_Os02g16520 Oryza sativa LOC_Os02g16520 N 0.944
LOC_Os02g18970 Oryza sativa LOC_Os02g18970 N 0.889
LOC_Os02g28020 Oryza sativa LOC_Os02g28020 N 0.944
LOC_Os03g21050 Oryza sativa LOC_Os03g21050 N 0.944
LOC_Os04g21180 Oryza sativa LOC_Os04g21180 N 0.944
LOC_Os05g19240 Oryza sativa LOC_Os05g19240 N 0.944
LOC_Os05g22590 Oryza sativa LOC_Os05g22590 N 0.889
LOC_Os05g24190 Oryza sativa LOC_Os05g24190 N 0.944
LOC_Os05g33340 Oryza sativa LOC_Os05g33340 N 0.944
LOC_Os05g51200 Oryza sativa LOC_Os05g51200 N 0.944
LOC_Os06g15460 Oryza sativa LOC_Os06g15460 N 0.944
LOC_Os06g20720 Oryza sativa LOC_Os06g20720 N 0.944
LOC_Os01g19360 Oryza sativa LOC_Os01g19360 N 0.944