LOC_Os06g19040 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g19040 T11600_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g19040.1 CCHC ZF 228 245

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

118 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ANIA_08557 Aspergillus nidulans CADANIAG00003050 N 0.000
estExt_fgenesh3_pg.C_50128 Chlorella NC64A estExt_fgenesh3_pg.C_50128 N 0.000
Minc12116 Meloidogyne incognita Minc12116 N 0.000
EuGene.0000020314 Micromonas pusilla EuGene.0000020314 N 0.000
LOC_Os11g35630 Oryza sativa LOC_Os11g35630 N 0.000
s_450977 Phytophthora sojae s_450977 N 0.000