LOC_Os09g09400 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os09g09400 T12106_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os09g09400.1 CCHC ZF 326 342

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R003219 Ailuropoda melanoleuca Ame_R003219 N 0.000
TIAL1 Echinops telfairi ENSETEG00000020276 N 0.000
TIAL1 Erinaceus europaeus ENSEEUG00000011861 N 0.000
TIAL1 Loxodonta africana ENSLAFG00000003412 N 0.000
TIAL1 Meleagris gallopavo ENSMGAG00000011368 N 0.000
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.000
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.000
TIAL1 Myotis lucifugus ENSMLUG00000004645 N 0.000
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.000
TIAL1 Otolemur garnettii ENSOGAG00000011417 N 0.000
TIAL1 Sorex araneus ENSSARG00000012980 N 0.000
TIAL1 Taeniopygia guttata ENSTGUG00000011148 N 0.000
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.000
AAH45086 Xenopus laevis AAH45086 N 0.000
CAC95017 Xenopus laevis CAC95017 N 0.000