estExt_fgenesh1_pg.C_3110010 (Physcomitrella patens)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 estExt_fgenesh1_pg.C_3110010 T13596_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_3110010 CCHC ZF 44 61

Links

Other CCHC ZF family RBPs
Other Physcomitrella patens RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s5532g9t1 Acyrtosiphon pisum DGIL_AUG5s5532g9t1 I 0.000
AGAP004942 Anopheles gambiae AGAP004942 N 0.000
amel4_ncbi_hmm16330 Apis mellifera amel4_ncbi_hmm16330 I 0.000
BGIBMGA012503 Bombyx mori BGIBMGA012503 N 0.000
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.000
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.000
GG16232 Drosophila erecta FBgn0108467 N 0.000
GH14429 Drosophila grimshawi FBgn0121905 N 0.000
FBgn0262737 Drosophila melanogaster FBgn0262737 N 0.000
GI13561 Drosophila mojavensis FBgn0136316 N 0.000
GA20351-RA Drosophila pseudoobscura FBgn0080346 N 0.000
GK10610 Drosophila willistoni FBgn0212625 N 0.000
GE22592 Drosophila yakuba FBgn0239809 N 0.000
ISCW016289 Ixodes scapularis ISCW016289 I 0.000
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.000