CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUBP1
(
Erinaceus europaeus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSEEUG00000001287
T18722_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000001156
KH
187
251
VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMV
ENSEEUP00000001156
KH
277
339
GIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEII
ENSEEUP00000001156
KH
378
443
EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLI
Links
Other
KH
family RBPs
Other
Erinaceus europaeus
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FUBP1
Callithrix jacchus
ENSCJAG00000007062
I
1.000
KHSRP
Canis familiaris
ENSCAFG00000018667
I
0.763
FUBP1
Cavia porcellus
ENSCPOG00000002757
I
1.000
FUBP1
Felis catus
ENSFCAG00000010330
N
1.000
FUBP1
Macropus eugenii
ENSMEUG00000007917
N
0.711
FUBP1
Oryctolagus cuniculus
ENSOCUG00000002225
I
1.000
KHSRP
Tarsius syrichta
ENSTSYG00000011552
N
0.747
FUBP1
Tupaia belangeri
ENSTBEG00000017333
N
0.732