FXR1 (Oryzias latipes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSORLG00000011787 T19290_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.853
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.822
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000014777 KH 220 279
ENSORLP00000014777 KH 283 351

Links

Other KH family RBPs
Other Oryzias latipes RBPs

95 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100392844 Callithrix jacchus ENSCJAG00000019154 N 0.000
ENSCAFG00000023462 Canis familiaris ENSCAFG00000023462 N 0.000
ENSCHOG00000001614 Choloepus hoffmanni ENSCHOG00000001614 N 0.000
HNRNPH1 Dasypus novemcinctus ENSDNOG00000007173 N 0.000
ENSDORG00000008260 Dipodomys ordii ENSDORG00000008260 N 0.000
Hnrnph3 Dipodomys ordii ENSDORG00000011470 N 0.000
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.000
HNRNPH1 Tetraodon nigroviridis ENSTNIG00000008997 N 0.000