CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUBP3
(
Sus scrofa
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSSSCG00000005702
T19497_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000006109
KH
5
62
TEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEI
ENSSSCP00000006109
KH
121
160
QERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMV
ENSSSCP00000006109
KH
187
249
SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVI
ENSSSCP00000006109
KH
288
353
EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRVFTIRGVPQQIEVARHLI
Links
Other
KH
family RBPs
Other
Sus scrofa
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCHOG00000003841
Choloepus hoffmanni
ENSCHOG00000003841
I
0.000
LOC100067495
Equus caballus
ENSECAG00000014429
I
0.000
HNRNPH2
Felis catus
ENSFCAG00000015400
I
0.000
HNRNPH1
Sorex araneus
ENSSARG00000003024
I
0.000
HNRNPH1
Tarsius syrichta
ENSTSYG00000006417
I
0.000
HNRNPH1
Tursiops truncatus
ENSTTRG00000000470
I
0.000