PCBP4 (Taeniopygia guttata)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTGUG00000006393 T19576_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.758
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.711
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.705
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.700
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000006570 KH 17 76
ENSTGUP00000006570 KH 99 162
ENSTGUP00000006570 KH 242 304

Links

Other KH family RBPs
Other Taeniopygia guttata RBPs

94 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.700
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.705
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.758
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.779
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.952
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.747
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.705
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.899
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.700
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.758
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.899
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.700
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.705
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.899
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.894
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.700
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.758
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.705
pcbp2 Danio rerio ENSDARG00000013184 D 0.711
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.705
LOC100060660 Equus caballus ENSECAG00000024218 I 0.899
PCBP2 Equus caballus ENSECAG00000022389 I 0.705
LOC100050101 Equus caballus ENSECAG00000012413 I 0.758
LOC100050579 Equus caballus ENSECAG00000002544 I 0.700
PCBP3 Gallus gallus ENSGALG00000013155 I 0.774
PCBP3 Gallus gallus ENSGALG00000004394 I 0.732
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.709
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.788
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.732
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.742
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.700
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.705
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.899
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.758
PCBP3 Homo sapiens ENSG00000183570 I 0.758
PCBP1 Homo sapiens ENSG00000169564 D 0.700
PCBP2 Homo sapiens ENSG00000197111 D 0.705
PCBP4 Homo sapiens ENSG00000090097 I 0.899
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.705
PCBP4 Loxodonta africana ENSLAFG00000010732 N 0.761
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.758
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.705
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.899
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.737
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.758
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.742
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.705
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.856
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.705
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.758
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.899
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.700
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.705
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.700
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.705
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.715
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.915
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.700
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.705
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.899
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.758
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.732
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.700
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.714
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.716
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.899
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.758
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.705
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.700
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.700
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.899
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.705
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.705
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.705
D3ZWQ9_RAT Rattus norvegicus ENSRNOG00000038946 N 0.741
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.700
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.899
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.758
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.705
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.768
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.704
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.742
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.700
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.788
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.737
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.778
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.742
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.758
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.705
CAB50743 Xenopus laevis CAB50743 I 0.711
AAH84195 Xenopus laevis AAH84195 I 0.711
AAH41241 Xenopus laevis AAH41241 I 0.711
CAD29864 Xenopus laevis CAD29864 I 0.711
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.711