CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GJ19895
(
Drosophila virilis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0207037
T19996_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0234312
KH
112
157
GESKRICQQITKETGAQIEIVSGKNQSLTFLIKGKQSELLDARRKI
FBpp0234312
KH
166
226
SRQVNVPREHYRVILGKRGERLRELERLTSTRINIPHQGDESDVITIAGTKEGIERAEQEI
FBpp0234312
KH
238
298
SDRTTVPKIYHPFIVGPYNENLNKLQEETGAKINVPPQQVQKEEIIISGEKEAVAAAKAKV
FBpp0234312
KH
311
371
TVSVEVAKPQHRYVIGPKGSTIAEILQLTGVSVEMPPNDSILETITLRGPQVALGNALTVV
FBpp0234312
KH
380
436
SVEINAPHWIHKYVIGRKGANMKQLEEDCPNVNVNCLENKIKLEGDPENVDRAVSYL
FBpp0234312
KH
449
508
YEVMTVNPSYYKHIIGKAGANVNRLKDELKVNINIEEREGQNNIRIEGPKEGVRQAQLEL
FBpp0234312
KH
520
581
SKDVIIDRRLHRSIIGAKGEKIREVKDRYRQVTITIPTPQENTDIVKLRGPKEDVDKCHKDL
FBpp0234312
KH
594
654
IIEVPIFKQFHKFVIGKGGANIKKIRDETQTKIDLPAEGDTNEVIVITGKKENVLEAKERI
FBpp0234312
KH
666
727
TEEVQISPKYYNSIIGTGGKLISSIMEECGGVTIKFPNSDSKSDKVTIRGPKDDVEKAKAQL
FBpp0234312
KH
740
801
SVEVRAKQQHHKFLIGKNGASIRKIRDATGARIIFPSNEDSDKEAIIIIGKEESVNKAKEQL
FBpp0234312
KH
813
874
EGEVTVDPKHHKHFVAKRGTILHRISEECGGVMISFPRPGTNSDKVTIKGAKECIEAAKQRI
FBpp0234312
KH
886
975
TIEVVIPQRQHRTIMGARGFKVQQVTSEFDVQIKFPDRDATEPVEGLTNGVNGDGSEGGEGEPSAAPVRQCDVIRITGRIEKCNAAKQAL
FBpp0234312
KH
982
1042
EEELNVPFDLHRTIIGPRGANVRQFMSTHDVHVELPPSDLKSDIIKVSGTPARVAEAREAL
FBpp0234312
KH
1062
1123
VLQVEVDPEYHSKLIGRQGAVINKLRADHDVNISLPKRDDPNQRIISITGYQAKAEAARDAI
FBpp0234312
KH
1135
1198
RDVIEIDTRIHSHIIGHRGRTIRKIIDDYKVDIKFPSADDPQANPNAVTIIGKEEDVENAKEML
Links
Other
KH
family RBPs
Other
Drosophila virilis
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GF12176
Drosophila ananassae
FBgn0089215
N
0.916
GG21892
Drosophila erecta
FBgn0114070
N
0.883
GH21672
Drosophila grimshawi
FBgn0129133
N
0.947
Dp1
Drosophila melanogaster
FBgn0027835
N
0.888
GI20125
Drosophila mojavensis
FBgn0142861
N
0.972
GL17775
Drosophila persimilis
FBgn0155378
N
0.887
GA18708-RA
Drosophila pseudoobscura
FBgn0078708
N
0.915
GM21884
Drosophila sechellia
FBgn0176761
N
0.877
GD11380
Drosophila simulans
FBgn0183129
N
0.889
GK22993
Drosophila willistoni
FBgn0224955
N
0.904
GE11968
Drosophila yakuba
FBgn0229746
N
0.892