gw.576.16.1 (Branchiostoma floridae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 gw.576.16.1 T21271_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.741
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.711
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
gw.576.16.1 KH 60 133

Links

Other KH family RBPs
Other Branchiostoma floridae RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000004873 Ciona intestinalis ENSCING00000004873 I 0.000
ENSCING00000012370 Ciona intestinalis ENSCING00000012370 I 0.000
ENSCSAVG00000002581 Ciona savignyi ENSCSAVG00000002581 I 0.000