CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BGIBMGA012503
(
Bombyx mori
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
BGIBMGA012503
T21509_0.6
SilkDB (2008-Apr-11)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA012503
KH
19
79
TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGNTTAIFKAFTLI
BGIBMGA012503
KH
103
168
TLRLIVPASQCGSLIGKGGSKIKEIRDVTGANIQSPPKGATIPYRPKPNVAGPVILAGGQAYTIQG
BGIBMGA012503
KH
272
337
SHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITITGNPDSVALAQYLI
Links
Other
KH
family RBPs
Other
Bombyx mori
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DGIL_AUG5s5532g9t1
Acyrtosiphon pisum
DGIL_AUG5s5532g9t1
I
0.758
AGAP004942
Anopheles gambiae
AGAP004942
N
0.756
amel4_ncbi_hmm16330
Apis mellifera
amel4_ncbi_hmm16330
I
0.746
PASA_GEN_0700132
Daphnia pulex
PASA_GEN_0700132
I
0.720
GG16232
Drosophila erecta
FBgn0108467
N
0.756
GH14429
Drosophila grimshawi
FBgn0121905
N
0.756
FBgn0262737
Drosophila melanogaster
FBgn0262737
N
0.756
GI13561
Drosophila mojavensis
FBgn0136316
N
0.756
GA20351-RA
Drosophila pseudoobscura
FBgn0080346
N
0.756
GJ11921
Drosophila virilis
FBgn0199174
N
0.756
GK10610
Drosophila willistoni
FBgn0212625
N
0.756
GE22592
Drosophila yakuba
FBgn0239809
N
0.756
nasonia_NCBI_hmm938274
Nasonia vitripennis
nasonia_NCBI_hmm938274
I
0.803