LARP1B (Takifugu rubripes)
La

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La) IPR006630 ENSTRUG00000005612 T22874_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000013536 La 285 342
ENSTRUP00000013538 La 215 272
ENSTRUP00000013539 La 304 361
ENSTRUP00000013540 La 279 336
ENSTRUP00000013541 La 25 82

Links

Other La family RBPs
Other Takifugu rubripes RBPs

86 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL009073 Aedes aegypti AAEL009073 N 0.700
Ame_R005086 Ailuropoda melanoleuca Ame_R005086 N 0.828
Ame_R010453 Ailuropoda melanoleuca Ame_R010453 N 0.828
LARP1 Anolis carolinensis ENSACAG00000004071 N 0.793
LARP1B Anolis carolinensis ENSACAG00000011338 N 0.845
AGAP005291 Anopheles gambiae AGAP005291 N 0.733
LARP1B Bos taurus ENSBTAG00000012135 N 0.828
LARP1 Bos taurus ENSBTAG00000008443 N 0.810
LOC100393482 Callithrix jacchus ENSCJAG00000004454 N 0.828
LARP1B Callithrix jacchus ENSCJAG00000003338 N 0.793
LARP1B Canis familiaris ENSCAFG00000003831 N 0.828
LARP1 Canis familiaris ENSCAFG00000017639 N 0.828
LARP1 Cavia porcellus ENSCPOG00000003377 N 0.828
LARP1B Choloepus hoffmanni ENSCHOG00000005354 N 0.793
ENSCING00000003088 Ciona intestinalis ENSCING00000003088 N 0.700
larp1 Danio rerio ENSDARG00000018434 N 0.776
LARP1B Dasypus novemcinctus ENSDNOG00000018765 N 0.828
LARP1 Dasypus novemcinctus ENSDNOG00000012073 N 0.828
ENSDORG00000013445 Dipodomys ordii ENSDORG00000013445 N 0.741
Larp1 Dipodomys ordii ENSDORG00000002897 N 0.828
LARP1B Echinops telfairi ENSETEG00000012497 N 0.724
LARP1 Echinops telfairi ENSETEG00000020251 N 0.828
LOC100071865 Equus caballus ENSECAG00000001088 N 0.828
LARP1 Equus caballus ENSECAG00000017002 N 0.828
LARP1 Erinaceus europaeus ENSEEUG00000001065 N 0.724
LARP1 Felis catus ENSFCAG00000000592 N 0.828
LARP1 Gallus gallus ENSGALG00000004001 N 0.810
LARP2 Gallus gallus ENSGALG00000010207 N 0.810
LARP1B Gasterosteus aculeatus ENSGACG00000004609 N 0.897
ENSGGOG00000006048 Gorilla gorilla ENSGGOG00000006048 N 0.828
ENSGGOG00000024102 Gorilla gorilla ENSGGOG00000024102 N 0.828
LARP1B Homo sapiens ENSG00000138709 N 0.793
LARP1 Homo sapiens ENSG00000155506 N 0.828
LARP1 Loxodonta africana ENSLAFG00000008991 N 0.828
ENSLAFG00000008473 Loxodonta africana ENSLAFG00000008473 N 0.828
LARP1B Macaca mulatta ENSMMUG00000021347 N 0.793
LARP1 Macaca mulatta ENSMMUG00000009411 N 0.828
LARP1 Macropus eugenii ENSMEUG00000002957 N 0.759
LARP1B Meleagris gallopavo ENSMGAG00000004809 N 0.741
LARP1 Meleagris gallopavo ENSMGAG00000005696 N 0.810
LARP1 Microcebus murinus ENSMICG00000000837 N 0.828
LARP1B Monodelphis domestica ENSMODG00000012300 N 0.845
LARP1 Monodelphis domestica ENSMODG00000008663 N 0.759
Larp1 Mus musculus ENSMUSG00000037331 N 0.828
Larp1b Mus musculus ENSMUSG00000037814 N 0.828
LARP1B Myotis lucifugus ENSMLUG00000010229 N 0.828
LARP1 Myotis lucifugus ENSMLUG00000002608 N 0.828
nasonia_NCBI_hmm577234 Nasonia vitripennis nasonia_NCBI_hmm577234 N 0.759
LARP1 Ochotona princeps ENSOPRG00000013014 N 0.828
LARP1B Ochotona princeps ENSOPRG00000005478 N 0.810
LARP1 Ornithorhynchus anatinus ENSOANG00000005096 N 0.810
LARP1B Oryctolagus cuniculus ENSOCUG00000013330 N 0.828
LARP1 Oryctolagus cuniculus ENSOCUG00000013066 N 0.828
LARP1 Oryzias latipes ENSORLG00000000824 N 0.845
LARP1B Oryzias latipes ENSORLG00000017954 N 0.897
LARP1 Otolemur garnettii ENSOGAG00000016750 N 0.828
LARP1B Otolemur garnettii ENSOGAG00000005771 N 0.810
LOC742664 Pan troglodytes ENSPTRG00000016437 N 0.793
LARP1 Pan troglodytes ENSPTRG00000017447 N 0.828
LARP1B Procavia capensis ENSPCAG00000007546 N 0.793
LARP1 Procavia capensis ENSPCAG00000006407 N 0.828
LARP1 Pteropus vampyrus ENSPVAG00000002262 N 0.828
LARP1B Pteropus vampyrus ENSPVAG00000005373 N 0.828
Larp1 Rattus norvegicus ENSRNOG00000031544 N 0.828
Larp1b Rattus norvegicus ENSRNOG00000038366 N 0.828
LARP1 Sorex araneus ENSSARG00000013907 N 0.741
LARP1 Spermophilus tridecemlineatus ENSSTOG00000005678 N 0.828
LARP1 Sus scrofa ENSSSCG00000017069 N 0.828
LARP1B Sus scrofa ENSSSCG00000009073 N 0.828
LARP1 Taeniopygia guttata ENSTGUG00000000704 N 0.810
LARP2 Taeniopygia guttata ENSTGUG00000002098 N 0.759
LARP1 Takifugu rubripes ENSTRUG00000009470 N 0.828
LARP1B Tarsius syrichta ENSTSYG00000002037 N 0.776
LARP1 Tarsius syrichta ENSTSYG00000013732 N 0.810
LARP1B Tetraodon nigroviridis ENSTNIG00000012398 N 0.948
LARP1B Tupaia belangeri ENSTBEG00000004177 N 0.741
LARP1 Tupaia belangeri ENSTBEG00000003381 N 0.759
LARP1 Tursiops truncatus ENSTTRG00000015934 N 0.828
LARP1B Tursiops truncatus ENSTTRG00000012984 N 0.828
LARP1B Vicugna pacos ENSVPAG00000007223 N 0.828
AAI34816 Xenopus laevis AAI34816 N 0.759
AAH93491 Xenopus laevis AAH93491 N 0.759
AAH98998 Xenopus laevis AAH98998 N 0.759
larp1 Xenopus tropicalis ENSXETG00000008413 N 0.793
larp1b Xenopus tropicalis ENSXETG00000022512 N 0.724