SS1G_01761 (Sclerotinia sclerotiorum)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 SS1G_01761 T23939_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_01761 PUF 489 522
SS1T_01761 PUF 524 557
SS1T_01761 PUF 564 589
SS1T_01761 PUF 601 634
SS1T_01761 PUF 645 670
SS1T_01761 PUF 673 705
SS1T_01761 PUF 721 749

Links

Other PUF family RBPs
Other Sclerotinia sclerotiorum RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_007170 Aspergillus flavus CADAFLAG00010780 N 0.727
AFUA_5G04340 Aspergillus fumigatus CADAFUAG00002839 N 0.735
AO090102000642 Aspergillus oryzae CADAORAG00009924 N 0.727
BC1G_02637 Botrytis cinerea BC1G_02637 N 1.000
CHGG_10227 Chaetomium globosum CHGG_10227 N 0.940
CIMG_06323 Coccidioides immitis CIMG_06323 N 0.772
CPSG_00751 Coccidioides posadasii CPSG_00751 N 0.772
GLRG_05168 Colletotrichum graminicola GLRG_05168 N 0.881
FOXG_07983 Fusarium oxysporum FOXG_07983 N 0.908
FVEG_04902 Fusarium verticillioides FVEG_04902 N 0.908
MCYG_01907 Microsporum canis MCYG_01907 N 0.767
MGYG_04164 Microsporum gypseum MGYG_04164 N 0.775
fgenesh1_pm.7_#_317 Myceliophthora thermophila fgenesh1_pm.7_#_317 N 0.927
gw1.14.69.1 Mycosphaerella fijiensis gw1.14.69.1 N 0.832
e_gw1.2.144.1 Mycosphaerella graminicola e_gw1.2.144.1 N 0.816
NFIA_037730 Neosartorya fischeri CADNFIAG00003211 N 0.743
NCU01760 Neurospora crassa NCU01760 N 0.936
estExt_fgenesh1_pm.C_130085 Neurospora tetrasperma estExt_fgenesh1_pm.C_130085 N 0.936
PMAA_095580 Penicillium marneffei PMAA_095580 N 0.765
EAT91264.2 Phaeosphaeria nodorum EAT91264.2 N 0.811
Pa_3_5000 Podospora anserina Pa_3_5000 N 0.927
SNOG_01615 Stagonospora nodorum SNOG_01615 N 0.811
fgenesh2_pm.6_#_443 Thielavia terrestris fgenesh2_pm.6_#_443 N 0.917
TEQG_03139 Trichophyton equinum TEQG_03139 N 0.763
TERG_04493 Trichophyton rubrum TERG_04493 N 0.768
TESG_00492 Trichophyton tonsurans TESG_00492 N 0.763
GSTUMT00009368001 Tuber melanosporum GSTUMT00009368001 N 0.811
UREG_04073 Uncinocarpus reesii UREG_04073 N 0.762
VDBG_05223 Verticillium albo atrum VDBG_05223 N 0.900
VDAG_08882 Verticillium dahliae VDAG_08882 N 0.900