CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NCU11928
(
Neurospora crassa
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
NCU11928
T24405_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU11928T0
PUF
582
614
VVGTIYTLCKDQHGCRYLQKKLDDRNEEQIHMI
NCU11928T0
PUF
617
648
ETNQHVIELMTDPFGNYLCQKLLELCSEDERT
NCU11928T0
PUF
657
688
DMVRIALNAHGTRALQKMIDSVSSPAQINLII
NCU11928T0
PUF
690
724
ALRNRVVELIQDLNGNHVIQKCLNKLNATDASFIF
NCU11928T0
PUF
727
757
VGQNCVEVGTHRHGCCVLQRCIDHADGAKKI
NCU11928T0
PUF
762
796
RITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLV
NCU11928T0
PUF
798
832
QFLGRIPQLSKHKFSSNVVEKCLRCASPNSKDRIV
NCU11928T0
PUF
836
870
MSQNEIKQLMQDSYGNYVVQTALDYATPSMKHQLV
Links
Other
PUF
family RBPs
Other
Neurospora crassa
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRADI3G52270
Brachypodium distachyon
BRADI3G52270
N
0.000
Cucsa.322000
Cucumis sativus
Cucsa.322000
N
0.000
Glyma09g33960.1
Glycine max
Glyma09g33960.1
N
0.000
Glyma01g01950.1
Glycine max
Glyma01g01950.1
N
0.000
BGIOSIBCE016423
Oryza indica
BGIOSIBCE016423
N
0.000
LOC_Os04g50790
Oryza sativa
LOC_Os04g50790
N
0.000
SB06G027200
Sorghum bicolor
Sb06g027200
N
0.000
SB01G010170
Sorghum bicolor
Sb01g010170
N
0.000
GRMZM2G035719
Zea mays
GRMZM2G035719
N
0.000
GRMZM2G127559
Zea mays
GRMZM2G127559
N
0.000