fgenesh1_pm.7_#_317 (Myceliophthora thermophila)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 fgenesh1_pm.7_#_317 T24851_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.7_#_317 PUF 466 499
fgenesh1_pm.7_#_317 PUF 501 534
fgenesh1_pm.7_#_317 PUF 541 566
fgenesh1_pm.7_#_317 PUF 578 611
fgenesh1_pm.7_#_317 PUF 621 647
fgenesh1_pm.7_#_317 PUF 653 683
fgenesh1_pm.7_#_317 PUF 698 725

Links

Other PUF family RBPs
Other Myceliophthora thermophila RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_007170 Aspergillus flavus CADAFLAG00010780 N 0.756
AFUA_5G04340 Aspergillus fumigatus CADAFUAG00002839 N 0.754
AO090102000642 Aspergillus oryzae CADAORAG00009924 N 0.756
BC1G_02637 Botrytis cinerea BC1G_02637 N 0.927
CHGG_10227 Chaetomium globosum CHGG_10227 N 0.963
CIMG_06323 Coccidioides immitis CIMG_06323 N 0.796
CPSG_00751 Coccidioides posadasii CPSG_00751 N 0.796
GLRG_05168 Colletotrichum graminicola GLRG_05168 N 0.889
FOXG_07983 Fusarium oxysporum FOXG_07983 N 0.912
FVEG_04902 Fusarium verticillioides FVEG_04902 N 0.912
MCYG_01907 Microsporum canis MCYG_01907 N 0.790
MGYG_04164 Microsporum gypseum MGYG_04164 N 0.795
gw1.14.69.1 Mycosphaerella fijiensis gw1.14.69.1 N 0.811
e_gw1.2.144.1 Mycosphaerella graminicola e_gw1.2.144.1 N 0.798
NFIA_037730 Neosartorya fischeri CADNFIAG00003211 N 0.772
NCU01760 Neurospora crassa NCU01760 N 0.967
estExt_fgenesh1_pm.C_130085 Neurospora tetrasperma estExt_fgenesh1_pm.C_130085 N 0.967
PMAA_095580 Penicillium marneffei PMAA_095580 N 0.794
EAT91264.2 Phaeosphaeria nodorum EAT91264.2 N 0.815
Pa_3_5000 Podospora anserina Pa_3_5000 N 0.958
SS1G_01761 Sclerotinia sclerotiorum SS1G_01761 N 0.927
SNOG_01615 Stagonospora nodorum SNOG_01615 N 0.815
fgenesh2_pm.6_#_443 Thielavia terrestris fgenesh2_pm.6_#_443 N 0.963
TEQG_03139 Trichophyton equinum TEQG_03139 N 0.787
TERG_04493 Trichophyton rubrum TERG_04493 N 0.791
TESG_00492 Trichophyton tonsurans TESG_00492 N 0.787
GSTUMT00009368001 Tuber melanosporum GSTUMT00009368001 N 0.830
UREG_04073 Uncinocarpus reesii UREG_04073 N 0.787
VDBG_05223 Verticillium albo atrum VDBG_05223 N 0.895
VDAG_08882 Verticillium dahliae VDAG_08882 N 0.895