fgenesh1_pm.C_chr_3000287 (Mycosphaerella graminicola)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		fgenesh1_pm.C_chr_3000287 T25363_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_chr_3000287 RRM 449 511
fgenesh1_pm.C_chr_3000287 PUF 658 692
fgenesh1_pm.C_chr_3000287 PUF 694 729
fgenesh1_pm.C_chr_3000287 PUF 731 764
fgenesh1_pm.C_chr_3000287 PUF 767 801
fgenesh1_pm.C_chr_3000287 PUF 810 838

Links

Other PUF,RRM family RBPs
Other Mycosphaerella graminicola RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RPB7 Candida albicans orf19.3347 N 0.000
Cd36_01440 Candida dubliniensis Cd36_01440 N 0.000
PGUG_02831 Candida guilliermondii PGUG_02831 N 0.000
CLUG_03627 Candida lusitaniae CLUG_03627 N 0.000
CPAG_00867 Candida parapsilosis CPAG_00867 N 0.000
CTRG_04454 Candida tropicalis CTRG_04454 N 0.000
DEHA0G08195g Debaryomyces hansenii DEHA0G08195g N 0.000
LELG_01428 Lodderomyces elongisporus LELG_01428 N 0.000
fgenesh1_pg.C_chr_1.1000254 Pichia stipitis fgenesh1_pg.C_chr_1.1000254 N 0.000
SPOG_03808 Schizosaccharomyces cryophilus SPOG_03808 N 0.000
SJAG_01436 Schizosaccharomyces japonicus SJAG_01436 N 0.000
SOCG_01722 Schizosaccharomyces octosporus SOCG_01722 N 0.000
rpb7 Schizosaccharomyces pombe SPACUNK4.06c N 0.000